LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g0674	ATGAGCGAAGAAGAGGAGAGTTTTATGAAAACGAACTGGGCGCATCCAGGTCTTTTTGTTGACCCTGCAAAATGTGGCACGCTGAATTTGCAAGACAAACAAAAACTAGTTCAAGAGATTGCTCAACAATCCAAAGATGCCAGAAATATGCTCTACTCCTTTACTCGCAAGGAGCTTCTAGAAATAATTTGTGCTGAGCTTGGCAAAGAGAGGAAGTACACTGGATATACCAAGACTCAAATGATAGAGTATCTTCTTAAGTTAATTTCTAAGAAATCCACTCTGCACATAGTCCAAAATAACAGTCACATTGGTTCTAAAAGGAAAAGTGGACCTCCCTCTCGAGATTTACATTATGTTCCTCTGGTGAATAATAAAGAGGAAAATGTAAAATCCTTACTGTGCCCGAATGTTGCATGCAGAGCTACTTTGTGTCCAGAAGATGCTTTTTGTAAGAGATGTTCTTGCTGTATTTGTCATTCTTATGATGATAACAAGGATCCTAGTTTATGGTTGACCTGTGGATCTGATCTTCTTGATGAGAAGGATTCATGTGGACTGTCGTGTCATTTACAATGTGCTTTGAATTATAAGAAGTCTGGCATTTTGAAAGACAGATTTAGTACAACGTTTGATGGAAGTTTTTCTTGTGTTTCTTGTGGAAAAATTAATGGATTAATGAGGACATGGAGGAAGCAATTATTGGTTGCAAAAGAAGCCAGAAGAGTTGATATACTGTGTTCACGGATATATTTGGCTCACAGAATTCTGTTAGGAACTGAGGTATACAAGGAAGTACATAAAATTGTCGAAGCTGCTCTCAAATTGCTTAACAATGAAGTGGGGCCTCAGGATCAGGAATGCTTAAGGATGACACGGGGCATTGTGAACAGGCTTTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTTATGCAGTTGAGCTTTTTGATTCAATGTTTCCTAACCTTTATCCTTACTCAGTGGAAAAGAAAGATGCACCAACATGCACTATACGTTTTGAAGAGTGCCTCCCCACCTCTGTTGTCATTGTGCTAGAGTATGAAGATCATCTTTTAAAAGACTTTTTGGGCTGCAGGCTTTGGCATAGAACATCAGCACTGGGCTACTCTGAACAACCCACCTTCATTGTATTAAGGCCGGAAAAAAAGTTTAAGCTGGAAAACCTCTATCCTTCAACCGAGTATTTTTGCAAGGCTTCGCTGTTTAGCAGCACGGGCATTCTGGGCACTGCAGAATCTAGATGGGTAACCCCTTGTAATCCCAGTGTATCTCCTTCAAAAGTTAATAGAACTGGCAGTGACAGGGATCATATTAGACATTCGCCTGATGGGTCCTCTGTTACCACCTTGGACACGCATGCGCAGGAAAAATACGGGATAGCTGTTGAAAATCATCATCGCATGGAATCTGCCAACTCTGACATCAACTCATTCTCTAGGGACCATCCCGCAAAACTTTTCTTCTCTGATAACTTCAGGGGTAGGTTTGAAGGGTTCCTCTCAAAGCCTCCATCAATTGAATCTATTCCATCTAAAACTTTTGCTGCGGTTTCACCTCCCACACCTTCGAAATTGGACGAAATGAGGCAAATTACTGATTTGGGTGATAGAAAGCGCTTGGAGGAAAATGACTATGAGTACTCTGTCAGGGTAGTCAAATGGTTAGAGCATGAAGGTCACATCGACCAAAACTTCAGAGTAAAATTTCTGACTTGGTTCAGCCTTAAAGCTAATCCACAAGAGAGAAGGGTGGTTAGCGCTTTTGTGGATGCATTGGTTGATGACCCACCAAGCTTAGTTGATCAACTTATACACACCTTCATGGACGAAATATGTTGCGAGCAAAAACCTTAG	1875	0.4112	MSEEEESFMKTNWAHPGLFVDPAKCGTLNLQDKQKLVQEIAQQSKDARNMLYSFTRKELLEIICAELGKERKYTGYTKTQMIEYLLKLISKKSTLHIVQNNSHIGSKRKSGPPSRDLHYVPLVNNKEENVKSLLCPNVACRATLCPEDAFCKRCSCCICHSYDDNKDPSLWLTCGSDLLDEKDSCGLSCHLQCALNYKKSGILKDRFSTTFDGSFSCVSCGKINGLMRTWRKQLLVAKEARRVDILCSRIYLAHRILLGTEVYKEVHKIVEAALKLLNNEVGPQDQECLRMTRGIVNRLSCGAEVQKLCSYAVELFDSMFPNLYPYSVEKKDAPTCTIRFEECLPTSVVIVLEYEDHLLKDFLGCRLWHRTSALGYSEQPTFIVLRPEKKFKLENLYPSTEYFCKASLFSSTGILGTAESRWVTPCNPSVSPSKVNRTGSDRDHIRHSPDGSSVTTLDTHAQEKYGIAVENHHRMESANSDINSFSRDHPAKLFFSDNFRGRFEGFLSKPPSIESIPSKTFAAVSPPTPSKLDEMRQITDLGDRKRLEENDYEYSVRVVKWLEHEGHIDQNFRVKFLTWFSLKANPQERRVVSAFVDALVDDPPSLVDQLIHTFMDEICCEQKP	624

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g0674	624	PANTHER	VIN3-LIKE PROTEIN 2-RELATED	19	464	IPR044514	GO:0010048\|GO:0040029
	Prci2g0674	624	Pfam	PHD - plant homeodomain finger protein	135	254	IPR032881	-
	Prci2g0674	624	CDD	PHD_VIN3_plant	155	220	-	-
	Prci2g0674	624	Coils	Coil	30	50	-	-
	Prci2g0674	624	MobiDBLite	consensus disorder prediction	431	456	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g0674	Prci-Chr2	4992104	4997581	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g0674	20	618	PHD Gene Family	AT5G57380	33.386	2.20e-101	319

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g0674	-		-	gmx:100785502	825.469

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