Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0674 ATGAGCGAAGAAGAGGAGAGTTTTATGAAAACGAACTGGGCGCATCCAGGTCTTTTTGTTGACCCTGCAAAATGTGGCACGCTGAATTTGCAAGACAAACAAAAACTAGTTCAAGAGATTGCTCAACAATCCAAAGATGCCAGAAATATGCTCTACTCCTTTACTCGCAAGGAGCTTCTAGAAATAATTTGTGCTGAGCTTGGCAAAGAGAGGAAGTACACTGGATATACCAAGACTCAAATGATAGAGTATCTTCTTAAGTTAATTTCTAAGAAATCCACTCTGCACATAGTCCAAAATAACAGTCACATTGGTTCTAAAAGGAAAAGTGGACCTCCCTCTCGAGATTTACATTATGTTCCTCTGGTGAATAATAAAGAGGAAAATGTAAAATCCTTACTGTGCCCGAATGTTGCATGCAGAGCTACTTTGTGTCCAGAAGATGCTTTTTGTAAGAGATGTTCTTGCTGTATTTGTCATTCTTATGATGATAACAAGGATCCTAGTTTATGGTTGACCTGTGGATCTGATCTTCTTGATGAGAAGGATTCATGTGGACTGTCGTGTCATTTACAATGTGCTTTGAATTATAAGAAGTCTGGCATTTTGAAAGACAGATTTAGTACAACGTTTGATGGAAGTTTTTCTTGTGTTTCTTGTGGAAAAATTAATGGATTAATGAGGACATGGAGGAAGCAATTATTGGTTGCAAAAGAAGCCAGAAGAGTTGATATACTGTGTTCACGGATATATTTGGCTCACAGAATTCTGTTAGGAACTGAGGTATACAAGGAAGTACATAAAATTGTCGAAGCTGCTCTCAAATTGCTTAACAATGAAGTGGGGCCTCAGGATCAGGAATGCTTAAGGATGACACGGGGCATTGTGAACAGGCTTTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTTATGCAGTTGAGCTTTTTGATTCAATGTTTCCTAACCTTTATCCTTACTCAGTGGAAAAGAAAGATGCACCAACATGCACTATACGTTTTGAAGAGTGCCTCCCCACCTCTGTTGTCATTGTGCTAGAGTATGAAGATCATCTTTTAAAAGACTTTTTGGGCTGCAGGCTTTGGCATAGAACATCAGCACTGGGCTACTCTGAACAACCCACCTTCATTGTATTAAGGCCGGAAAAAAAGTTTAAGCTGGAAAACCTCTATCCTTCAACCGAGTATTTTTGCAAGGCTTCGCTGTTTAGCAGCACGGGCATTCTGGGCACTGCAGAATCTAGATGGGTAACCCCTTGTAATCCCAGTGTATCTCCTTCAAAAGTTAATAGAACTGGCAGTGACAGGGATCATATTAGACATTCGCCTGATGGGTCCTCTGTTACCACCTTGGACACGCATGCGCAGGAAAAATACGGGATAGCTGTTGAAAATCATCATCGCATGGAATCTGCCAACTCTGACATCAACTCATTCTCTAGGGACCATCCCGCAAAACTTTTCTTCTCTGATAACTTCAGGGGTAGGTTTGAAGGGTTCCTCTCAAAGCCTCCATCAATTGAATCTATTCCATCTAAAACTTTTGCTGCGGTTTCACCTCCCACACCTTCGAAATTGGACGAAATGAGGCAAATTACTGATTTGGGTGATAGAAAGCGCTTGGAGGAAAATGACTATGAGTACTCTGTCAGGGTAGTCAAATGGTTAGAGCATGAAGGTCACATCGACCAAAACTTCAGAGTAAAATTTCTGACTTGGTTCAGCCTTAAAGCTAATCCACAAGAGAGAAGGGTGGTTAGCGCTTTTGTGGATGCATTGGTTGATGACCCACCAAGCTTAGTTGATCAACTTATACACACCTTCATGGACGAAATATGTTGCGAGCAAAAACCTTAG 1875 0.4112 MSEEEESFMKTNWAHPGLFVDPAKCGTLNLQDKQKLVQEIAQQSKDARNMLYSFTRKELLEIICAELGKERKYTGYTKTQMIEYLLKLISKKSTLHIVQNNSHIGSKRKSGPPSRDLHYVPLVNNKEENVKSLLCPNVACRATLCPEDAFCKRCSCCICHSYDDNKDPSLWLTCGSDLLDEKDSCGLSCHLQCALNYKKSGILKDRFSTTFDGSFSCVSCGKINGLMRTWRKQLLVAKEARRVDILCSRIYLAHRILLGTEVYKEVHKIVEAALKLLNNEVGPQDQECLRMTRGIVNRLSCGAEVQKLCSYAVELFDSMFPNLYPYSVEKKDAPTCTIRFEECLPTSVVIVLEYEDHLLKDFLGCRLWHRTSALGYSEQPTFIVLRPEKKFKLENLYPSTEYFCKASLFSSTGILGTAESRWVTPCNPSVSPSKVNRTGSDRDHIRHSPDGSSVTTLDTHAQEKYGIAVENHHRMESANSDINSFSRDHPAKLFFSDNFRGRFEGFLSKPPSIESIPSKTFAAVSPPTPSKLDEMRQITDLGDRKRLEENDYEYSVRVVKWLEHEGHIDQNFRVKFLTWFSLKANPQERRVVSAFVDALVDDPPSLVDQLIHTFMDEICCEQKP 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0674 624 PANTHER VIN3-LIKE PROTEIN 2-RELATED 19 464 IPR044514 GO:0010048|GO:0040029
Prci2g0674 624 Pfam PHD - plant homeodomain finger protein 135 254 IPR032881 -
Prci2g0674 624 CDD PHD_VIN3_plant 155 220 - -
Prci2g0674 624 Coils Coil 30 50 - -
Prci2g0674 624 MobiDBLite consensus disorder prediction 431 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0674 Prci-Chr2 4992104 4997581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0674 20 618 PHD Gene Family AT5G57380 33.386 2.20e-101 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0674 - - gmx:100785502 825.469