Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0669 ATGGGGGAAACTGACAAGAAGAACAAGAAGGTCGCTTTTAGCGAGGAAGACGCTGCTGCTCTCTTGGACAAGTACGATGCAACCACCGTTATCACTTTTCTTCAGGAAGTGTCAAACTATCCTGATCCCAAGATTGATTGGAATGAGTTGGTAAAAAACACAGCAACTGGGATATCAAATGCTAGAGAGGGTCAGATGTTATGGCGTTATCTGGCGTATCATGATTCCTTGCCTGAAAATTTGGAAGACGGGGCTGAACCTTTGGACGATGATAGTGACTTAGAACGTGAGATAGAAGTGGTACCCCCTATAAACAATGAGGCTGCGTCAGAGGCTTCAGCTTGTGTGAAGGTTATGATAGCTTCTGCTTCACTTAGTGAAATTGGTTCTAGCAGCTCAACAATTGAGGCTCCCATGACTATAAATATTCCAAATTGTCATTCGTCTACAAATCCTGAAGAAAATATACAGCCCTCAAATTTGGTACAAGGAGCAAGTGTTACTTTTCCTGTCACTGTTCAGAGACAGACACTATCAACTGGATCTGTGACTGAAGGCGTAGAAGCCAAGGGAACAGCTGGAAGCAAATTGTCTTCCAAAAGGAGAAGAAAAGCATGGTCAGAAGAAGAGGACAAGCAACTACGAGCAGCTGTTCAGAAATGTGGTGAGGGAAATTGGGCAACCATGTCAAAAGGAGATGACTTCCCTATCAAAAGAAGTCCTACACAGTTGGCTCAGAGGTGGAGCATTTTACGAAAGAAAGATGGCACTTCAAATTCAGGAACAAACTTGACCAGCTCACAGTTTACTGCTGAACAGCTGGCAACTCGTCACTCATTATCTTTAGCCCTTGATATGCCATTAAAAAAATTAACTGCTCCTGGAACGACTGACCCTGCTAGGGCCTCATTAAATGCATCAATTAAGAACCCTGTGCAACCTATTAATACTGCTGAAGCTTCAACAGTTCAGAGCAGCTCCGTGCCGCCTCAGCTTCCATCTCAACAAGCTGTATTGGTTTCTTCTGCTTCCCCTGCAAATTCTTTAGCCCCTGAAAGAACAACGCTGAAGTCTAATAAAAGTGCTGATGCTGCTGTAAGAGCTACTGCAGTTGCAGTTGGTGCTCGCATTGTCTCCTCGGCTGATGTTTTGTCTGTGCAGAAGGCTACTCTGGACAGAACCGCTGGACAAATTGTGCCCACTGGCAATTCTTCAATGAAGCTGTCCACACCTGCTGGTTCTGTCATCCACCTGAAAGCTCCTATAAATTCAGCTGTTTCTCCTAAAGCTGTTGCCACTGCACCTCCTTGCACTACTGCTGTTAAATCTGTCGCCCCATCGGGTGAGAGCACTTCTAATGGCCATACCCTTCGCTCTGTGGCCAGTAATCTTCCATTAGAGCAAGTTAATCCTAACCAAGAATCAAAAGTCTCTGATTCTAATACTGAACCGAAAGACAGGGTCCAAGGTGATGAGGCACCAGTCACGGAAAGCATACCTAATGAGGAAAGTTTAGAAAGTAAATCGGTTTCACAAAATACAAGAGAGTTTGATGATCAGGGAGCAATTTGA 1572 0.4453 MGETDKKNKKVAFSEEDAAALLDKYDATTVITFLQEVSNYPDPKIDWNELVKNTATGISNAREGQMLWRYLAYHDSLPENLEDGAEPLDDDSDLEREIEVVPPINNEAASEASACVKVMIASASLSEIGSSSSTIEAPMTINIPNCHSSTNPEENIQPSNLVQGASVTFPVTVQRQTLSTGSVTEGVEAKGTAGSKLSSKRRRKAWSEEEDKQLRAAVQKCGEGNWATMSKGDDFPIKRSPTQLAQRWSILRKKDGTSNSGTNLTSSQFTAEQLATRHSLSLALDMPLKKLTAPGTTDPARASLNASIKNPVQPINTAEASTVQSSSVPPQLPSQQAVLVSSASPANSLAPERTTLKSNKSADAAVRATAVAVGARIVSSADVLSVQKATLDRTAGQIVPTGNSSMKLSTPAGSVIHLKAPINSAVSPKAVATAPPCTTAVKSVAPSGESTSNGHTLRSVASNLPLEQVNPNQESKVSDSNTEPKDRVQGDEAPVTESIPNEESLESKSVSQNTREFDDQGAI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0669 523 ProSiteProfiles Myb-like domain profile. 198 252 IPR001005 -
Prci2g0669 523 Pfam Myb-like DNA-binding domain 203 248 IPR001005 -
Prci2g0669 523 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 512 - -
Prci2g0669 523 SMART sant 202 254 IPR001005 -
Prci2g0669 523 Gene3D - 195 259 - -
Prci2g0669 523 MobiDBLite consensus disorder prediction 182 211 - -
Prci2g0669 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 256 IPR017930 -
Prci2g0669 523 MobiDBLite consensus disorder prediction 462 523 - -
Prci2g0669 523 MobiDBLite consensus disorder prediction 462 478 - -
Prci2g0669 523 CDD SANT_TRF 204 253 - -
Prci2g0669 523 SUPERFAMILY Homeodomain-like 201 254 IPR009057 -
Prci2g0669 523 MobiDBLite consensus disorder prediction 321 349 - -
Prci2g0669 523 MobiDBLite consensus disorder prediction 500 523 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci2g0669 Myb_DNA-binding 4.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0669 - - gmx:100805773 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0669 2 4927178 4936040 Prci2g0669 2 4927178 4936040 ECH