Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0664 ATGGCCTATCTAGGTTCAATGCAGCTGTCTCACGACATTATGGCCTACGATAATAGGGGATGCTGCAGTTTTCATCGTAAACCAACGGGCGTTGGTCGATTACATTTGGTTACCATCAATCTTTTGCCTTATGCTTTGAGGCGGGATTCTTTAGCTCTCCATCTTTTAAGTAAAGTACATGCCCCACTAAGGCCCGTTCCTACAAGATGTAATGTTTTATTGTGTCGTTCCATATTGACGCCAGGCGGAGGGAGTTGGACCCCACTATTGAAATCTGCTTCTGTCATCTTTAAAAGATCATATGATGCTTTGCAAGGAAGCCCTGTCACAACTCAGTTGATGCCAGCCCTTGGTGTCATTGTCTTTGCTGTTTGTGGTCTTGAGCCTCTTTTGCGTCTATGCAGGATTATATTTCTCCAAAGGAATGATAATAGTTGGAAGAAAAGTAGTTCACGTTATGTTATGACTTCTTATTTTCAGCCTTTGCTGCTGTGGACTGGGGCTATGCTCATCTGCAGGGCATTAGATCCACTAATCCTACCATCAGAAGCCAGCCAGGCAGTGAAGCAACGGCTGCTGAATTTTGTGAGATCTTTGTCAACTGTGCTTTCATTTGCTTACTGTTTATCAAGCGTGATTCAACAAGCACAAAAATTCTTTATGGAGGCGAATGAATCCAGTGATGCAAGAAATATGGGCTTTGATTTTGCGGGGAAAGCTGTATATACTGCTGTCTGGGTTGCTGCCGTATCATTGTTCATGGAGCTTCTAGGTTTTTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGTACAGTATTGCTCACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCCAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGATTAAAACCAAGATTGAAGGATATGAGGTTTCTGGTATAGTAGAGCATGTAGGTTGGTGGTCACCAACAATTGTGAGAGGTGATGATCGTGAAGCAGTCCATATTCCTAATCACAAGTTCACTGTCAACGTCGTGCGGAATCTTACACAGAGAACTCATTGGCGTATCAAGACTCACCTTGCTATTAGTCACTTGGATGTTAACAAGATTAATAATATTGTTGCTGATATGCGCAAAGTTTTGGCCAAAAATCCTCTGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGCATGTCAATACTGAAAATCAGTCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTCTGTGTCCAGGAGGCCATCCTTTTGGATCTTCTGAGAGTTATTAGTCATCATCGAGCCCGGCTAGCCACCCCCATCCGCACAGTCCAGAAAATATACAGTGAGGCTGACTTGGAAAACATACCATTTGGCGACACCATTTTTACACGCCCCAGATCAGCAGGAAATCGCCCATTTCTACTGATAGAGCCACCTTACAAAGTTAATGGTGAAGATAGAGCCAAGGCTTCTACTCGTTCAACACGTCCAAGTGAAGAAAAGGATGCCAAAAGTGATGAAACATTATCTGATTCCAAAGATGACAGTTTTGCTGCAACATCAACATCCAGTCCAAACTCCAGGGATAAATCAAAGTCAATCTCTGAAGCACAAACACAGAATATGGGTTCTGATAGTACCGTCCAGAAGACATCCAAAACCACGCAGCCCAAAAAGGAAAGTGCCGGAGATGCAGGAAAGGGGATTGCTTCCCCTGTAAATAAAGATGTTGCTCAAAGTTCGGCCCCTGAAAATTCTTCTGCTTCTTCCCTTGAGCCTGGGGGAAGGGGAGACACCACTCCTGCTACATCTTTACAGGCAAAGCAGGACGAAGACAAATATGCTGTATCCTCCTCACCAGCCAGGCCGGCCTTGGAAGAAAATATTGTTCTTGGTGTTGCCCTAGAGGGCTCAAAAAGAACTCTTCCGATTGACGAAGAGATGACTCCACCTCCAATCCCCACAGAGGCACAGGAATTTGCAGCCCAAAGAAATGGAAATGGACCTGCTAGCAAGGATAAAAAGGATGGTCAAATTTCTACCAAGCAGCCGAGTGACTAG 2100 0.4386 MAYLGSMQLSHDIMAYDNRGCCSFHRKPTGVGRLHLVTINLLPYALRRDSLALHLLSKVHAPLRPVPTRCNVLLCRSILTPGGGSWTPLLKSASVIFKRSYDALQGSPVTTQLMPALGVIVFAVCGLEPLLRLCRIIFLQRNDNSWKKSSSRYVMTSYFQPLLLWTGAMLICRALDPLILPSEASQAVKQRLLNFVRSLSTVLSFAYCLSSVIQQAQKFFMEANESSDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIKTKIEGYEVSGIVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPLVEQQKLHRRVFLEHVNTENQSLMILISCFVKTSHFEEYLCVQEAILLDLLRVISHHRARLATPIRTVQKIYSEADLENIPFGDTIFTRPRSAGNRPFLLIEPPYKVNGEDRAKASTRSTRPSEEKDAKSDETLSDSKDDSFAATSTSSPNSRDKSKSISEAQTQNMGSDSTVQKTSKTTQPKKESAGDAGKGIASPVNKDVAQSSAPENSSASSLEPGGRGDTTPATSLQAKQDEDKYAVSSSPARPALEENIVLGVALEGSKRTLPIDEEMTPPPIPTEAQEFAAQRNGNGPASKDKKDGQISTKQPSD 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0664 699 MobiDBLite consensus disorder prediction 587 626 - -
Prci2g0664 699 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Prci2g0664 699 MobiDBLite consensus disorder prediction 527 572 - -
Prci2g0664 699 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Prci2g0664 699 Gene3D - 297 350 IPR023408 -
Prci2g0664 699 MobiDBLite consensus disorder prediction 497 526 - -
Prci2g0664 699 MobiDBLite consensus disorder prediction 497 638 - -
Prci2g0664 699 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 693 IPR045042 -
Prci2g0664 699 MobiDBLite consensus disorder prediction 650 699 - -
Prci2g0664 699 Gene3D - 193 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0664 Prci-Chr2 4886874 4893753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0664 6 660 Mechanosensitive Ion Channel Family AT1G58200 55.213 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0664 K22047 - gmx:100796022 1029.24