Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0661 ATGCAGCTGTCTCACGACATTATGGCCTACGATAATAGGGGATGCTGCAGTTTTCATCGTAAACCAACGGGCGTTGGTCGATTACATTTGGTTACCATCAATCTTTTGCCTTATGCTTTGAGGCGGGATTCTTTAGCTCTCCATCTTTTAAGTAAAGTACATGCCCCACTAAGGCCCGTTCCTACAAGATGTAATGTTTTATTGTGTCGTTCCATATTGACGCCAGGCGGAGGGAGTTGGACCCCACTATTGAAATCTGCTTCTGTCATCTTTAAAAGATCATATGATGCTTTGCAAGGAAGCCCTGTCACAACTCAGTTGATGCCAGCCCTTGGTGTCATTGTCTTTGCTGTTTGTGGTCTTGAGCCTCTTTTGCGTCTATGCAGGATTATATTTCTCCAAAGGAATGATAATAGTTGGAAGAAAAGTAGTTCACGTTATGTTATGACTTCTTATTTTCAGCCTTTGCTGCTGTGGACTGGGGCTATGCTCATCTGCAGGGCATTAGATCCACTAATCCTACCATCAGAAGCCAGCCAGGCAGTGAAGCAACGGCTGCTGAATTTTGTGAGATCTTTGTCAACTGTGCTTTCATTTGCTTACTGTTTATCAAGCGTGATTCAACAAGCACAAAAATTCTTTATGGAGGCGAATGAATCCAGTGATGCAAGAAATATGGGCTTTGATTTTGCGGGGAAAGCTGTATATACTGCTGTCTGGGTTGCTGCCGTATCATTGTTCATGGAGCTTCTAGGTTTTTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGTACAGTATTGCTCACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCCAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGATTAAAACCAAGATTGAAGGATATGAGGTTTCTGGTATAGTAGAGCATGTAGGTTGGTGGTCACCAACAATTGTGAGAGGTGATGATCGTGAAGCAGTCCATATTCCTAATCACAAGTTCACTGTCAACGTCGTGCGGAATCTTACACAGAGAACTCATTGGCGTATCAAGACTCACCTTGCTATTAGTCACTTGGATGTTAACAAGATTAATAATATTGTTGCTGATATGCGCAAAGTTTTGGCCAAAAATCCTCTGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGCATGTCAATACTGAAAATCAGTCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTCTGTGTCCAGGAGGCCATCCTTTTGGATCTTCTGAGAGTTATTAGTCATCATCGAGCCCGGCTAGCCACCCCCATCCGCACAGTCCAGAAAATATACAGTGAGGCTGACTTGGAAAACATACCATTTGGCGACACCATTTTTACACGCCCCAGATCAGCAGGAAATCGCCCATTTCTACTGATAGAGCCACCTTACAAAGTTAATGGTGAAGATAGAGCCAAGGCTTCTACTCGTTCAACACGTCCAAGTGAAGAAAAGGATGCCAAAAGTGATGAAACATTATCTGATTCCAAAGATGACAGTTTTGCTGCAACATCAACATCCAGTCCAAACTCCAGGGATAAATCAAAGTCAATCTCTGAAGCACAAACACAGAATATGGGTTCTGATAGTACCGTCCAGAAGACATCCAAAACCACGCAGCCCAAAAAGGAAAGTGCCGGAGATGCAGGAAAGGGGATTGCTTCCCCTGTAAATAAAGATGTTGCTCAAAGTTCGGCCCCTGAAAATTCTTCTGCTTCTTCCCTTGAGCCTGGGGGAAGGGGAGACACCACTCCTGCTACATCTTTACAGGCAAAGCAGGACGAAGACAAATATGCTGTATCCTCCTCACCAGCCAGGCCGGCCTTGGAAGAAAATATTGTTCTTGGTGTTGCCCTAGAGGGCTCAAAAAGAACTCTTCCGATTGACGAAGAGATGACTCCACCTCCAATCCCCACAGAGGCACAGGAATTTGCAGCCCAAAGAAATGGAAATGGACCTGCTAGCAAGGATAAAAAGGATGGTCAAATTTCTACCAAGCAGCCGAGTGACTAG 2082 0.4385 MQLSHDIMAYDNRGCCSFHRKPTGVGRLHLVTINLLPYALRRDSLALHLLSKVHAPLRPVPTRCNVLLCRSILTPGGGSWTPLLKSASVIFKRSYDALQGSPVTTQLMPALGVIVFAVCGLEPLLRLCRIIFLQRNDNSWKKSSSRYVMTSYFQPLLLWTGAMLICRALDPLILPSEASQAVKQRLLNFVRSLSTVLSFAYCLSSVIQQAQKFFMEANESSDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIKTKIEGYEVSGIVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPLVEQQKLHRRVFLEHVNTENQSLMILISCFVKTSHFEEYLCVQEAILLDLLRVISHHRARLATPIRTVQKIYSEADLENIPFGDTIFTRPRSAGNRPFLLIEPPYKVNGEDRAKASTRSTRPSEEKDAKSDETLSDSKDDSFAATSTSSPNSRDKSKSISEAQTQNMGSDSTVQKTSKTTQPKKESAGDAGKGIASPVNKDVAQSSAPENSSASSLEPGGRGDTTPATSLQAKQDEDKYAVSSSPARPALEENIVLGVALEGSKRTLPIDEEMTPPPIPTEAQEFAAQRNGNGPASKDKKDGQISTKQPSD 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0661 693 MobiDBLite consensus disorder prediction 581 620 - -
Prci2g0661 693 Gene3D - 291 344 IPR023408 -
Prci2g0661 693 Gene3D - 187 290 - -
Prci2g0661 693 MobiDBLite consensus disorder prediction 491 632 - -
Prci2g0661 693 MobiDBLite consensus disorder prediction 491 520 - -
Prci2g0661 693 MobiDBLite consensus disorder prediction 521 566 - -
Prci2g0661 693 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 687 IPR045042 -
Prci2g0661 693 Pfam Mechanosensitive ion channel 233 440 IPR006685 GO:0016020|GO:0055085
Prci2g0661 693 SUPERFAMILY Sm-like ribonucleoproteins 276 346 IPR010920 -
Prci2g0661 693 MobiDBLite consensus disorder prediction 644 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0661 Prci-Chr2 4886874 4893753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0661 1 654 Mechanosensitive Ion Channel Family AT1G58200 55.294 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0661 K22047 - gmx:100796022 1025.77