Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0654 ATGGAAAAAGCAGAAGAAGCCGAACGCTTGCTTGGGGTCGCCGAAAAGCTCTTGTCCGATCGGGATCTTACCGGCTCAAGAGAATTTGCCATTTTGGCCCAGGAAACCGAACCTCTTCTAGAGGGTTCCGATCAAATCCTGGCCGTTGTTGATGTTCTCCTCGCTGCTGATAACCGCATCAGCAACCACCTCGATTGGTACGCTATTCTTCAGGTTGATCGCCGATCGGATGACTTAGATTTCATTAAGAAGCAATATCGGAGGCTCGCACTTCTCCTCCACCCTGACAAGAACAGGTTCTCCCACGCTGATCATGCATTCAAGCTCGTCGCCGAGGCATGGGCTATTCTATCGGATCCCGCCAAAAAGTCGCACTACGACAAGGAGCTTGGCTTCTTCTCTACGGTTGATTTGAGCTCGCCTGGCTGGGTTCATCAAGAGAAATTACCCGTTCGAAGAGCCGGAACGGGGTACGGTCGTGGTGGAAACCAAGGGTTTGATTTCAGGAATAATGGCAAAGCCACTAGGGACGCTGGGAATTTACGACGGAGTTCGTCGACGTTCTGGACAGCCTGCCCCTACTGTTATTTGCTGTGCGAGTATCATAAGATGTACGAGGGATGCTGTCTAAGATGCCAGAACTGTGAGAGGTCATTCCATGGGGTTTCGATTCCGACTTTGCCGCCGCTTGTGCCAGGCCAGGAGGCCTATTATTGTTGCTGGGGATTCTTTCCATTGACTTTAGCCACTGCTAATTCTGGCGGCAAAGAATCTGCGACTCCTCCAGGATTTCCGAATTGGACGCCCATGGCATCTGAATCTGGCCGGCGGCCAGAGAATTATTGGAGTAAAGCAGAACCCGTGGCGGCCGCAAAGCCTGTGTCAAAGACAGCGACGGCCGTGGGTGTTTCTAATGGGATCACTTCAGGTCCAGGATCTAGTGGGCGGAAGCGAGGAAGGCCGAGGAAGGCCCCAGCAGAATCCTTTGTTATCATAAACTAG 1002 0.522 MEKAEEAERLLGVAEKLLSDRDLTGSREFAILAQETEPLLEGSDQILAVVDVLLAADNRISNHLDWYAILQVDRRSDDLDFIKKQYRRLALLLHPDKNRFSHADHAFKLVAEAWAILSDPAKKSHYDKELGFFSTVDLSSPGWVHQEKLPVRRAGTGYGRGGNQGFDFRNNGKATRDAGNLRRSSSTFWTACPYCYLLCEYHKMYEGCCLRCQNCERSFHGVSIPTLPPLVPGQEAYYCCWGFFPLTLATANSGGKESATPPGFPNWTPMASESGRRPENYWSKAEPVAAAKPVSKTATAVGVSNGITSGPGSSGRKRGRPRKAPAESFVIIN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0654 333 SMART dnaj_3 64 122 IPR001623 -
Prci2g0654 333 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 287 - -
Prci2g0654 333 Pfam DnaJ domain 65 127 IPR001623 -
Prci2g0654 333 MobiDBLite consensus disorder prediction 301 333 - -
Prci2g0654 333 PRINTS DnaJ domain signature 67 85 IPR001623 -
Prci2g0654 333 PRINTS DnaJ domain signature 86 101 IPR001623 -
Prci2g0654 333 PRINTS DnaJ domain signature 102 122 IPR001623 -
Prci2g0654 333 ProSiteProfiles dnaJ domain profile. 65 130 IPR001623 -
Prci2g0654 333 SUPERFAMILY Chaperone J-domain 58 130 IPR036869 -
Prci2g0654 333 CDD DnaJ 65 119 IPR001623 -
Prci2g0654 333 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Prci2g0654 333 Gene3D DnaJ domain 54 136 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0654 Prci-Chr2 4825800 4830288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0654 6 326 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.507 1.17e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0654 - - gmx:100816918 409.838