Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0644 ATGAAAGGTGATTATGTGGAGCAGCACGCCAAGCAAGAGACTCCCAATATGTTCTCCAAGCTTCACCACCACCCTTTCCCCCACCACCCCTTCCAGCTCTCTCGCGACCCCCAAACCTCCGAGGAAGATGACACCCGCAGCGCCACCGCCGCCCACACCCCCAACCACCCTCAAAAGCCCCTCTCCGTCGAGCCCTCCTCTGCCGCCGATGGCTCCAGCATTGAGGTCGTCAGGCGCCCCAGGGGCCGCCCGCCTGGCTCCAAAAACAAGCCCAAGCCCCCCGTCATCATTACCCGTGACCCCGAGCCTACCATGAGTTCCTTCATTCTCGAGGTCCCCGGCGGGACGGACGTCGTCGAAGCGATTGCTCGCTTCTGTCGCCGCAAGAACACTGGCCTCTGCGTGTTAACGGGATCGGGGACCGTAGCTAACGTCACCCTCCGCCAGCCCTCCACCACCCCGGGGGCTACCGTTACTTTTCACGGCCGTTTCGACATCTTATCCATATCTGCCACCTTTCTGGCCAACCAGCAATCGGGTGCTTTGCCGGCGGTCCCCAACAGCTTCACCATATCGCTGGCCGGCCCGCAGGGTCAGATCGTCGGAGGATTGGTCGCCGGCAATTTGTTGGCGGCGGGAACTGTGTTCGTCATAGCCGCTTCCTTCAACAACCCGTCCTATCACAGGTTACCGGCTGAGGAGGACGTCAGGAACTCCGTCTCGGGCGGCGGCGGAGAGGGGCAGTCCCCGCCGGTGTCCGGAGGTGGTGGGGAGAGCGGTCACGCGCCCGGCGATTCGTGTGGGATGTCCATGTACAGCTGTCAACTACCGTCCGATGTGATCTGGGCTCCAACTGCAAGGCCACCGCCGCCATACTGA 879 0.6268 MKGDYVEQHAKQETPNMFSKLHHHPFPHHPFQLSRDPQTSEEDDTRSATAAHTPNHPQKPLSVEPSSAADGSSIEVVRRPRGRPPGSKNKPKPPVIITRDPEPTMSSFILEVPGGTDVVEAIARFCRRKNTGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSISATFLANQQSGALPAVPNSFTISLAGPQGQIVGGLVAGNLLAAGTVFVIAASFNNPSYHRLPAEEDVRNSVSGGGGEGQSPPVSGGGGESGHAPGDSCGMSMYSCQLPSDVIWAPTARPPPPY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0644 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 42 283 IPR014476 GO:0003680
Prci2g0644 292 MobiDBLite consensus disorder prediction 236 268 - -
Prci2g0644 292 MobiDBLite consensus disorder prediction 35 49 - -
Prci2g0644 292 ProSiteProfiles PPC domain profile profile. 102 243 IPR005175 -
Prci2g0644 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 234 - -
Prci2g0644 292 PIRSF ESCAROLA 9 284 IPR014476 GO:0003680
Prci2g0644 292 MobiDBLite consensus disorder prediction 18 101 - -
Prci2g0644 292 Gene3D - 105 240 - -
Prci2g0644 292 MobiDBLite consensus disorder prediction 50 69 - -
Prci2g0644 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 224 IPR005175 -
Prci2g0644 292 CDD DUF296 108 222 IPR005175 -
Prci2g0644 292 FunFam AT-hook motif nuclear-localized protein 106 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0644 Prci-Chr2 4772892 4774237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0644 1 292 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.067 2.99e-109 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0644 - - qsa:O6P43_015380 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0644 2 4772892 4774237 Prci2g0644 2 4772892 4774237 ECH