Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0624 ATGGCACCCAGTTTCGATTGCGTTTCGAGTCTTCTTTGTACGGAAGACAGCATCGTATTCGACGATAACGATTACGAGAGTGCGATGGGGGTGTCCCAGAATTCGCGGCATCAAACATCCCATCGACTTCACAATCCAGGCCTTTTCTTTGATGATGCAGCTGGGTTGCCATTGCAGAGCGATGAGTGTTTGGCGATAATGGTGGAAAAAGAATGCCAGCACATCCCTGCTGGCGATTACTTGAATAAGCTACGGACTGGTGTTTTGGACTCGGGGGCTAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCGTGCTCATTTCCATTTTGGACCTCTCTGTTCATACTTATCCATAAACTACATGGATCGCTTCCTGTCTCTATATGAATTACCAAAGGGAAAATCTTGGTCAATGCAATTGCTGGCTGTAGCATGCTTATCTCTCGCAGCCAAACTAGAGGAGAATGAAGTTCCCCTGTGTGTTGATTTGCAGGTGGCTGAATCAAAATTTATATTTGAAGCTAGAACAATCCAGAGAATGGAGCTTCTCATACTAAGTACACTTAAGTGGAGAATGCAAGCAATTAGCCCTTTCTCCTTTATTGACCATTTCCTAAGCAAGATCAACGAAGATCAAATTCCGCTTAGAACTTCAACATCAAAATCTATGCAACTTATATTGAATACCGTGAGAGGGATTGACTCATTGGAATTCAAGCCATCAGAAATAGCAGCAGCAGTGGCAATATTTGTTGTGGGGGAAACCCAAACAGTTAATGCAGAGAAAGCTATCTCTGTTCTTTCTCAACACGTAGAAAAGGAGAGAGTCTTGAGGTGTTTTAAAGTGGTCCAAGAGCTGTCATCAAACAGCAGCATCATCAGCTCTTCTGGTGCTTCTGTTCCTCGAAGCCCAATTGGGGTGTTGGATGCGGCATGCTTGAGCTATAAAAGTGATGAAATAGACGGTTCATGTTCAAATTCTTCACATAATAATAGTCCGGATGCTAAAAGGAGGAAGCTAAACAAAAACTGTGCAACTGATCCATAA 1050 0.4314 MAPSFDCVSSLLCTEDSIVFDDNDYESAMGVSQNSRHQTSHRLHNPGLFFDDAAGLPLQSDECLAIMVEKECQHIPAGDYLNKLRTGVLDSGARKEAIDWIEKVRAHFHFGPLCSYLSINYMDRFLSLYELPKGKSWSMQLLAVACLSLAAKLEENEVPLCVDLQVAESKFIFEARTIQRMELLILSTLKWRMQAISPFSFIDHFLSKINEDQIPLRTSTSKSMQLILNTVRGIDSLEFKPSEIAAAVAIFVVGETQTVNAEKAISVLSQHVEKERVLRCFKVVQELSSNSSIISSSGASVPRSPIGVLDAACLSYKSDEIDGSCSNSSHNNSPDAKRRKLNKNCATDP 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0624 349 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Prci2g0624 349 Pfam Cyclin, C-terminal domain 197 291 IPR004367 -
Prci2g0624 349 Gene3D - 65 281 - -
Prci2g0624 349 SUPERFAMILY Cyclin-like 57 193 IPR036915 -
Prci2g0624 349 FunFam D2/4-type cyclin 77 189 - -
Prci2g0624 349 MobiDBLite consensus disorder prediction 322 349 - -
Prci2g0624 349 SUPERFAMILY Cyclin-like 178 253 IPR036915 -
Prci2g0624 349 FunFam D6-type cyclin 190 282 - -
Prci2g0624 349 PANTHER CYCLINS 60 289 IPR039361 -
Prci2g0624 349 SMART cyclin_7 99 187 IPR013763 -
Prci2g0624 349 Gene3D - 77 194 - -
Prci2g0624 349 MobiDBLite consensus disorder prediction 333 349 - -
Prci2g0624 349 CDD CYCLIN_AtCycD-like_rpt2 196 282 - -
Prci2g0624 349 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Prci2g0624 349 SMART Cyclin_C_2 196 317 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0624 Prci-Chr2 4601242 4604149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0624 67 320 Core Cell Cycle Gene Families AT2G22490 48.507 5.78e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0624 K18810 - qsa:O6P43_015367 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0624 2 4601242 4604149 Prci2g0624 2 4601242 4604149 ECH