Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0623 ATGGGAAAAGATTGTGGAATCTGGATACCGCAGCTGCATTTTGATTGGCAATCACCCAATTTGAGTTCCTTCTCTTCCCTTGACGTGGGGAAGCAAAATGGTTGCATAAATATGATGCCTGAAAATTATACGATGCCAGATTCTGTGCCCTCCATGCTACCATGTTCGCAGTTAGCGCAGTCCTTTGAACCTTATGGTTGGTCCTATGGTTCACCTCACTTTCAACAGGCATTTATCCCTGCTCCAAACTTCACTTTGGAGAGCAAGCTCCCTGCTAGCCATGAAAAAGGTATTGGGGAGGAAATTGCACCCGACAGGATACCGGGCTTCCCTAAGAAGCGGTTCATTGTTATTGACCAGACTGTCAATCAGACAGCATTCATATATAGTCCTGGGTTTGGAAGTCCCATTGAGTGCCTTGCTTCTTGGCATTCAAAGCTGCGTGGTCCTGACTATTTGAATGGGAATGAACGTTCTTTGAAAAGAGATTTGAATAATCTGAATGGACCAACTTTGAATGATAAACTTGATAAAAATCAGGGAATTGAGGTCCAAAGTGAGATGCATGAAGACACAGAAGAAATCAATGCGTTACTTTACTCTGATAGTGATGGTTACTCCACTGAGGATGATGAAGTTACTAGCACTGGGCACTCGCCCAGTATAATGACCACTCATGATGACCAAGACTTCTTTTGCGGAAGCAATGAAGAAGTTGGTAGCTGCGATGGTGGAGAAGTTGGTAGCGCTGCTGGGAAAACAACAAAGAAGCGGAAGCTGTCTGCCAATGGGGCTTGTGAGCACGATGATGACCTACAGCTCATGGACAGTGCCAGTTCTCTAAATCTAAATAGATCCTTTGACAACGAATATGATGCTGAATCAAGATGTTCTAGTGGCAACAGTGAAGGATCAAGCAAGAAGAAGATGAGAAAAGAGAGGATACGGGATGTTCTAAACATCCTGCAAACCATAATTCCTGGTGGAAAAGAAAGGGACCCGATTGGGCTTCTTGATGAAGCAATTTGTTGCCTGAAATCACTGAAACTCAAGGCTAGAGCTCTAGGACTCCATGACTAG 1080 0.4417 MGKDCGIWIPQLHFDWQSPNLSSFSSLDVGKQNGCINMMPENYTMPDSVPSMLPCSQLAQSFEPYGWSYGSPHFQQAFIPAPNFTLESKLPASHEKGIGEEIAPDRIPGFPKKRFIVIDQTVNQTAFIYSPGFGSPIECLASWHSKLRGPDYLNGNERSLKRDLNNLNGPTLNDKLDKNQGIEVQSEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSIMTTHDDQDFFCGSNEEVGSCDGGEVGSAAGKTTKKRKLSANGACEHDDDLQLMDSASSLNLNRSFDNEYDAESRCSSGNSEGSSKKKMRKERIRDVLNILQTIIPGGKERDPIGLLDEAICCLKSLKLKARALGLHD 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0623 359 MobiDBLite consensus disorder prediction 203 227 - -
Prci2g0623 359 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 299 348 IPR011598 GO:0046983
Prci2g0623 359 PANTHER TRANSCRIPTION FACTOR BHLH145 8 357 IPR037546 -
Prci2g0623 359 MobiDBLite consensus disorder prediction 210 227 - -
Prci2g0623 359 MobiDBLite consensus disorder prediction 292 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0623 Prci-Chr2 4583869 4587681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0623 56 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.581 2.02e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0623 - - aprc:113846036 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0623 2 4583869 4587681 Prci2g0623 2 4583869 4587681 ECH