Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0618 ATGGGCTTCCTCTCTTGCAACGCTGAAACTGCAATTGCCACCTGTGATTCCCACTACTGGGACCTCAAGAAGAAGAACTCCAATAGAACCAGCAGAAGAACCCAGAAGCATAAGCTCCCAGAGATCAGGGAGTTTCGCTACTCGGAGATCCTCGCTGCCACTGGCGGATTCTCCGCAGACAGCTTCCTGGGAAAAGGCAGCCATGGCAGTGTCTACAGAGCAACCCTCGACGACGGCAAGCTCGTCGCCGCGGTCAAAAGAACAAAGTTCTCCAAGTCCCGGGTCACAAACCTCCGCAACCACTCCACCAACTGCACCGGCTGTGCTAGCTGTACGAGCCCCGCAGAGAACGAGATCGAGATTCTCTCCCAGGTTGGAAATCCTCGCCGCTTCGTCAACCTCATTGGATTCTGCACCGACTCCAACGGCAATCAGCTAATTGTCGTTGAATACATGCTCAACGGCTCTCTCTACGATGCCTTGCACTCCACCGCCAGACCGCCCAGTTGGAGCCGGCGGGTTCGGTTCGCTCTGCAGGTTGCCAAAGCCGTGCTGGCCCTTCACTCGTCGAATCCCCCGGTGATTCACCGGGACATAAAGTCGTCCAACGTCCTGATCGACGAGAAGGGGAAGGCGAGGCTGGGCGATTTCGGTCTGGCATTGAGGGGACACGTAGAGGACGTCCGGATGAAATGCACGCCACCCGCGGGGACGATGGGATACCTGGACCCATGCTACCTGGCTCCCGGGGACCTGAGCACAAAGAGCGACGTGTTCAGCTTCGGGATCCTGTTGCTCGAGATTATCAGCGGCAGGAACGCCATCGATTTGAATTACAGCCCGCCCTCCGTGGTGGACTGGGCCGTGCCCCTGATAAAGCGCGGGGAGTTTCTCGGAATCTGTGACCGGCGAATCGGGAGGCCGTCAGACATGGCGGTTATAAGGCATCTGGGGACGCTGGCGGCGAGGTGCGTGAGGTCGACGGCTGAGAAGAGGCCGTCGATGAGGGAGGCGGTGGAGTGGCTGGAACAAGTGAGGAAGAGGGCGGAGGCGACGCCCCTATGGAGAGGCCTGAGGCGGCGGGAGGAGAATAGCCAGGAATTGGGCGATCGGAGCGAGGAAGTGGGAAGAATAGTGAGAGGGGGAAGCAGAAGGAACGGGAAAGTGTCGAGCGTGGGCAGTGTGGAGCAAGAGAACGAGAGGAGTGAAGCTTGCAATGCAGTGTCCAGGTCGAGATCAATGCCGAATGGGAATGCGGGGGGCACTGCGAGGAGGTTGTACAGATCAAGGTCCATGTCCACGGAGGGTTTTGCAAAGTTCACTTCACGGCCTGGATTACACGAGCCGCAAGAGCAGCAGCCACTTCACAGCCAGCTAGATTAA 1383 0.5835 MGFLSCNAETAIATCDSHYWDLKKKNSNRTSRRTQKHKLPEIREFRYSEILAATGGFSADSFLGKGSHGSVYRATLDDGKLVAAVKRTKFSKSRVTNLRNHSTNCTGCASCTSPAENEIEILSQVGNPRRFVNLIGFCTDSNGNQLIVVEYMLNGSLYDALHSTARPPSWSRRVRFALQVAKAVLALHSSNPPVIHRDIKSSNVLIDEKGKARLGDFGLALRGHVEDVRMKCTPPAGTMGYLDPCYLAPGDLSTKSDVFSFGILLLEIISGRNAIDLNYSPPSVVDWAVPLIKRGEFLGICDRRIGRPSDMAVIRHLGTLAARCVRSTAEKRPSMREAVEWLEQVRKRAEATPLWRGLRRREENSQELGDRSEEVGRIVRGGSRRNGKVSSVGSVEQENERSEACNAVSRSRSMPNGNAGGTARRLYRSRSMSTEGFAKFTSRPGLHEPQEQQPLHSQLD 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0618 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Prci2g0618 460 Gene3D Phosphorylase Kinase; domain 1 27 151 - -
Prci2g0618 460 MobiDBLite consensus disorder prediction 446 460 - -
Prci2g0618 460 MobiDBLite consensus disorder prediction 361 460 - -
Prci2g0618 460 PANTHER OS01G0253100 PROTEIN 22 349 - -
Prci2g0618 460 MobiDBLite consensus disorder prediction 387 418 - -
Prci2g0618 460 Gene3D Transferase(Phosphotransferase) domain 1 152 357 - -
Prci2g0618 460 ProSiteProfiles Protein kinase domain profile. 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0618 460 FunFam Serine/threonine-protein kinase-like protein 152 355 - -
Prci2g0618 460 SUPERFAMILY Protein kinase-like (PK-like) 40 353 IPR011009 -
Prci2g0618 460 SMART serkin_6 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0618 460 MobiDBLite consensus disorder prediction 361 381 - -
Prci2g0618 460 Pfam Protein tyrosine and serine/threonine kinase 61 340 IPR001245 GO:0004672|GO:0006468
Prci2g0618 460 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0618 Prci-Chr2 4535018 4537197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0618 43 403 Receptor kinase-like Gene Family AT3G59420 38.798 1.82e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Prci2g0618 PK_Tyr_Ser-Thr 2.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0618 - - pcin:129303265 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0618 2 4535018 4537197 Prci15g0646 15 4226302 4228070 CCT