Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0610 ATGAGGAAGAAAAGGAAAGGAAGCGAGACAGATGCATCCTCAAATCTTCCAGAAATTTTGACTTCACATCATGGGAACCATGGATCTCTGTCATCAAACTTAAAGTCTCATTACTCGCTAGAAGATTGTTCCAGGTTGAAGAAGAGGTGTAAAGAAGATGCTGATGCAGAACCGGTTGCTTCCTGTGATAAAAGGCTCGCAGGCTTTGCCACCGCTCCGCCTTGTGGGACATCATCTTTGATTAAACCTGGAAGAGGTCTTAAGAGGAAGATAGGATGCATTGATGTTGCTACTCAAATGGGCAGGAAGAAAAAGATCGAGGATGATTATATTTTTGGTGAAACAATTGGGCAAGGCAAATTTGGATCTGTCTCTTTGTGTCGGTCCCGGCTTAGTGGAGCAGAATATGCATGTAAGACCCTGAGGAAGGGGGAGGAGACTGTTCATCGAGAAGTGGAGATAATGCAACACTTATCTGGACATCCTGGGGTTGTGACGCTGCAGGCAGTGTATGAAGAAGCAGACTGCTTCCATCTTGTAATGGAGTTGTGTTCTGGAGGGCGATTGATTGATAGGATGGTTAAGGAGGGCCCTTGTAAAGAGCAAATGGCTGCTAATGTACTCAAGGAAGTGATGTTAGTCATTAAGTATTGTCATGATATGGGAGTTGTTCACAGAGATGTCAAACCTGAAAATATCCTGCTAACAGCATCAGGAAAAATAAAGCTTGCAGATTTTGGACTGGCCATGAGAATATCTAATGGTCAGAACTTGACTGGTTTGGCCGGAAGCCCTGCGTATGTTGCTCCGGAGGTATTGCTGGGTAGCTATTCTGAGAAGGTGGATGTGTGGAGTGCTGGAGTTCTCCTGCATACTCTGTTAGTTGGCTTTCTTCCATTTCATGGAGATTCGCTGGAAGCTGTCTTTGAAGCTATTAAGAATGTCAAACTAGATTACCAAAAGGGTATGTGGAATTTGATATCTAAGCCTGCCCGAGATCTTGTTGGGAGGATGCTGATGAGGGATGTTCAAGCAAGGATAACAGCTGATGAAGTACTTAGGCATCCATGGTTGCTATTCTACACAGAACCTACTCTAAAAAAACTGCCCATCAGAACAAGGTTGAAGCATCAAATGGGAGCCACTTGCCGCCAGTTTGTTGCACCTGGACAAAGGTCTGGAGGAGACAAGATAGACAATGGTTCCCTTGGTGAAATTTCAAGCCCGCTTTCATCCTCGGAGAGTAACAATTCAGAAGATGAGGACGATGGTGTGTTGATTGATGTGCTGGCATCTGCAATTTCACATGTGAGGATATCAGAACCCAAGAGAAGCAGGTTGTGTGGACCAACAGGTCCAATAGATCAGCAAGGATCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1416 0.4449 MRKKRKGSETDASSNLPEILTSHHGNHGSLSSNLKSHYSLEDCSRLKKRCKEDADAEPVASCDKRLAGFATAPPCGTSSLIKPGRGLKRKIGCIDVATQMGRKKKIEDDYIFGETIGQGKFGSVSLCRSRLSGAEYACKTLRKGEETVHREVEIMQHLSGHPGVVTLQAVYEEADCFHLVMELCSGGRLIDRMVKEGPCKEQMAANVLKEVMLVIKYCHDMGVVHRDVKPENILLTASGKIKLADFGLAMRISNGQNLTGLAGSPAYVAPEVLLGSYSEKVDVWSAGVLLHTLLVGFLPFHGDSLEAVFEAIKNVKLDYQKGMWNLISKPARDLVGRMLMRDVQARITADEVLRHPWLLFYTEPTLKKLPIRTRLKHQMGATCRQFVAPGQRSGGDKIDNGSLGEISSPLSSSESNNSEDEDDGVLIDVLASAISHVRISEPKRSRLCGPTGPIDQQGSSNMKANNLCKAF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0610 471 SMART serkin_6 110 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0610 471 Gene3D Transferase(Phosphotransferase) domain 1 101 390 - -
Prci2g0610 471 MobiDBLite consensus disorder prediction 1 33 - -
Prci2g0610 471 CDD STKc_CAMK 109 357 - -
Prci2g0610 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Prci2g0610 471 Pfam Protein kinase domain 112 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0610 471 MobiDBLite consensus disorder prediction 12 33 - -
Prci2g0610 471 FunFam Serine/threonine-protein kinase PEPKR2 101 426 - -
Prci2g0610 471 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Prci2g0610 471 PANTHER SERINE/THREONINE-PROTEIN KINASE 97 384 - -
Prci2g0610 471 MobiDBLite consensus disorder prediction 386 421 - -
Prci2g0610 471 SUPERFAMILY Protein kinase-like (PK-like) 101 381 IPR011009 -
Prci2g0610 471 ProSiteProfiles Protein kinase domain profile. 110 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0610 Prci-Chr2 4427720 4434775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0610 94 357 EF-hand Containing Proteins AT2G38910 42.909 2.13e-74 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci2g0610 Pkinase 4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0610 - - pcin:129303422 910.598