Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0608 ATGCGGAGGTTCAGTTGGTTAACGCCGCAGTATCGGCGTCAAGTTCTAGCATCTATGGCTTTGGAAGCGCCCGTTGATCAAGGAAAGTCCATTAGTAAATTATTGTCCTTTAGCCAATCGCTGTCTAGCAGACGAGCTTTGATGAGCTGCAATTTTGCGAAGATAAATGACCACTTTGCAATTTCAATAATGCCTTTAAATTTTCGTTATATTCATGCCACAGCATTTCTTTCTTCTATTGAACGAGACTACTATCAAATTCTTGGTGTTCCTGAAACTGCCAGTCAGGACGATATCAAGAAGGCATTTCACAGGCTCGCTAAGAAGTACCATCCTGATGCAAATAAGAATAATCCATCTGCCAAGAGGAAATTTCAAGATGTAAGAGAAGCTTATGAGACCTTGAGAGATTCTAAAAAAAGGGCACATTTTGACAAGATGAGAACTTCTGATTCTGGGAACATAGAATATGAACGGGATGCCGAAGAACAGTTCAGAAATGCTCATAGGGCTCACTTTTCTGATTCATTTCACAAAATCTTCTCTGAGATGTTTGAAGAAGCAACAACTCATTCTGCATCAAATATTGAGGTCGAGATATCACTTTCTTTCTCAGAAGCTGTTAAGGGGTGCACCAAACGTGTGTCTTTTGATGCCATTGTTCCCTGTGATTTTTGCGATGGGCGAGGCTATTCACACAATGCAAAGGCAATTGTTTGTCCAACATGCAGGGGCGTAGGCAGAGTTACAATCCCTCCATTTACATCAACATGCATCACTTGTAGAGGATCAGGCCGAGTCATCAAGGACCATTGTAAATCTTGTGGAGGATCTGGGGTGGTAGAAGGCATCAAGGAGGTTAAAGTTACTGTACCAGCAGGTGTGGATTCAGGAGATACAATTCATGTGCCGGAAGCTGGACATGCTGCTGGACGTGGAGGTCAACCTGGAAGTCTATATATTAAAATAAAGGTGGCTAAGGATCCTGTTTTTGCCAGAGATGGTGCAGATATTTATGTGGAGTCTAACATCAGCTTTACACAAGCTATTCTTGGTGGTGAAGTTGAGGTGCCTACATTATCAGGAAAGATGCTAGTAAAAATACCTAAGGGCGTTCAACCAGGACAGCTTCTGATATTAAGGGGCAAAGGACTTCCAAAGCATGGTTTTCTTGTGGACCATGGAGACCAGCTCGTGCGCTTCCGTGTTAACTTCCCCGTTACAATTAATGAACGACAACGAGCCATCCTAGAAGAACTTGCAAAGGAGGAAATAAAGGAGGGATACAATTCACAGATTGAAGGAAATTGGCTTCACCAGCAGCTATCTACTGGTTAA 1338 0.426 MRRFSWLTPQYRRQVLASMALEAPVDQGKSISKLLSFSQSLSSRRALMSCNFAKINDHFAISIMPLNFRYIHATAFLSSIERDYYQILGVPETASQDDIKKAFHRLAKKYHPDANKNNPSAKRKFQDVREAYETLRDSKKRAHFDKMRTSDSGNIEYERDAEEQFRNAHRAHFSDSFHKIFSEMFEEATTHSASNIEVEISLSFSEAVKGCTKRVSFDAIVPCDFCDGRGYSHNAKAIVCPTCRGVGRVTIPPFTSTCITCRGSGRVIKDHCKSCGGSGVVEGIKEVKVTVPAGVDSGDTIHVPEAGHAAGRGGQPGSLYIKIKVAKDPVFARDGADIYVESNISFTQAILGGEVEVPTLSGKMLVKIPKGVQPGQLLILRGKGLPKHGFLVDHGDQLVRFRVNFPVTINERQRAILEELAKEEIKEGYNSQIEGNWLHQQLSTG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0608 445 Hamap Chaperone protein DnaJ [dnaJ]. 80 436 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Prci2g0608 445 CDD DnaJ_C 194 406 - -
Prci2g0608 445 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 45 424 - -
Prci2g0608 445 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 210 281 IPR036410 -
Prci2g0608 445 ProSiteProfiles dnaJ domain profile. 83 148 IPR001623 -
Prci2g0608 445 SUPERFAMILY HSP40/DnaJ peptide-binding domain 330 417 IPR008971 GO:0006457|GO:0051082
Prci2g0608 445 ProSiteProfiles Zinc finger CR-type profile. 210 284 IPR001305 GO:0031072|GO:0051082
Prci2g0608 445 Pfam DnaJ central domain 223 279 IPR001305 GO:0031072|GO:0051082
Prci2g0608 445 CDD DnaJ_zf 223 279 IPR001305 GO:0031072|GO:0051082
Prci2g0608 445 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Prci2g0608 445 SUPERFAMILY Chaperone J-domain 82 178 IPR036869 -
Prci2g0608 445 Pfam DnaJ domain 83 145 IPR001623 -
Prci2g0608 445 Gene3D - 194 324 - -
Prci2g0608 445 Gene3D - 327 435 - -
Prci2g0608 445 Gene3D DnaJ domain 80 193 IPR036869 -
Prci2g0608 445 FunFam Chaperone protein dnaJ 1, mitochondrial 326 433 - -
Prci2g0608 445 PRINTS DnaJ domain signature 85 103 IPR001623 -
Prci2g0608 445 PRINTS DnaJ domain signature 120 140 IPR001623 -
Prci2g0608 445 PRINTS DnaJ domain signature 103 118 IPR001623 -
Prci2g0608 445 Pfam DnaJ C terminal domain 196 406 IPR002939 -
Prci2g0608 445 Gene3D - 253 286 - -
Prci2g0608 445 Gene3D - 218 252 - -
Prci2g0608 445 SUPERFAMILY HSP40/DnaJ peptide-binding domain 195 326 IPR008971 GO:0006457|GO:0051082
Prci2g0608 445 SMART dnaj_3 82 140 IPR001623 -
Prci2g0608 445 CDD DnaJ 83 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0608 Prci-Chr2 4411229 4418827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0608 79 149 C2H2 Transcription Factor Family AT1G74250 36.842 3.41e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0608 - - gmx:100809440 656.366