Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0605 ATGCGGAGGTTCAGTTGGTTAACGCCGTATCGGCGTCAAGTTCTAGCATCTATGGCTTTGGAAGCGCCCGTTGATCAAGGAAAGTCCATTAGTAAATTATTGTCCTTTAGCCAATCGCTGTCTAGCAGACGAGCATTTCTTTCTTCTATTGAACGAGACTACTATCAAATTCTTGGTGTTCCTGAAACTGCCAGTCAGGACGATATCAAGAAGGCATTTCACAGGCTCGCTAAGAAGTACCATCCTGATGCAAATAAGAATAATCCATCTGCCAAGAGGAAATTTCAAGATGTAAGAGAAGCTTATGAGACCTTGAGAGATTCTAAAAAAAGGGCACATTTTGACAAGATGAGAACTTCTGATTCTGGGAACATAGAATATGAACGGGATGCCGAAGAACAGTTCAGAAATGCTCATAGGGCTCACTTTTCTGATTCATTTCACAAAATCTTCTCTGAGATGTTTGAAGAAGCAACAACTCATTCTGCATCAAATATTGAGGTCGAGATATCACTTTCTTTCTCAGAAGCTGTTAAGGGGTGCACCAAACGTGTGTCTTTTGATGCCATTGTTCCCTGTGATTTTTGCGATGGGCGAGGCTATTCACACAATGCAAAGGCAATTGTTTGTCCAACATGCAGGGGCGTAGGCAGAGTTACAATCCCTCCATTTACATCAACATGCATCACTTGTAGAGGATCAGGCCGAGTCATCAAGGACCATTGTAAATCTTGTGGAGGATCTGGGGTGGTAGAAGGCATCAAGGAGGTTAAAGTTACTGTACCAGCAGGTGTGGATTCAGGAGATACAATTCATGTGCCGGAAGCTGGACATGCTGCTGGACGTGGAGGTCAACCTGGAAGTCTATATATTAAAATAAAGGTGGCTAAGGATCCTGTTTTTGCCAGAGATGGTGCAGATATTTATGTGGAGTCTAACATCAGCTTTACACAAGCTATTCTTGGTGGTGAAGTTGAGGTGCCTACATTATCAGGAAAGATGCTAGTAAAAATACCTAAGGGCGTTCAACCAGGACAGCTTCTGATATTAAGGGGCAAAGGACTTCCAAAGCATGGTTTTCTTGTGGACCATGGAGACCAGCTCGTGCGCTTCCGTGTTAACTTCCCCGTTACAATTAATGAACGACAACGAGCCATCCTAGAAGAACTTGCAAAGGAGGAAATAAAGGAGGGATACAATTCACAGATTGAAGGAAATTGGTGGCAGCAAATTCTTGAACACGTCACGGGTCCAAAGTTTGTGTTGGAACTATCCATGCTGATGTTAATCCTCCTCTTCATCCATAAATTGTTGAGCTGA 1320 0.4311 MRRFSWLTPYRRQVLASMALEAPVDQGKSISKLLSFSQSLSSRRAFLSSIERDYYQILGVPETASQDDIKKAFHRLAKKYHPDANKNNPSAKRKFQDVREAYETLRDSKKRAHFDKMRTSDSGNIEYERDAEEQFRNAHRAHFSDSFHKIFSEMFEEATTHSASNIEVEISLSFSEAVKGCTKRVSFDAIVPCDFCDGRGYSHNAKAIVCPTCRGVGRVTIPPFTSTCITCRGSGRVIKDHCKSCGGSGVVEGIKEVKVTVPAGVDSGDTIHVPEAGHAAGRGGQPGSLYIKIKVAKDPVFARDGADIYVESNISFTQAILGGEVEVPTLSGKMLVKIPKGVQPGQLLILRGKGLPKHGFLVDHGDQLVRFRVNFPVTINERQRAILEELAKEEIKEGYNSQIEGNWWQQILEHVTGPKFVLELSMLMLILLFIHKLLS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0605 439 SUPERFAMILY HSP40/DnaJ peptide-binding domain 300 387 IPR008971 GO:0006457|GO:0051082
Prci2g0605 439 FunFam Chaperone protein dnaJ 1, mitochondrial 296 403 - -
Prci2g0605 439 Gene3D - 223 256 - -
Prci2g0605 439 Gene3D - 188 222 - -
Prci2g0605 439 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 180 251 IPR036410 -
Prci2g0605 439 ProSiteProfiles Zinc finger CR-type profile. 180 254 IPR001305 GO:0031072|GO:0051082
Prci2g0605 439 Pfam DnaJ C terminal domain 166 376 IPR002939 -
Prci2g0605 439 SMART dnaj_3 52 110 IPR001623 -
Prci2g0605 439 CDD DnaJ 53 107 IPR001623 -
Prci2g0605 439 Pfam DnaJ domain 53 115 IPR001623 -
Prci2g0605 439 CDD DnaJ_C 164 376 - -
Prci2g0605 439 Gene3D - 164 294 - -
Prci2g0605 439 Gene3D - 296 404 - -
Prci2g0605 439 Hamap Chaperone protein DnaJ [dnaJ]. 50 406 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Prci2g0605 439 Pfam DnaJ central domain 193 249 IPR001305 GO:0031072|GO:0051082
Prci2g0605 439 ProSiteProfiles dnaJ domain profile. 53 118 IPR001623 -
Prci2g0605 439 Gene3D DnaJ domain 50 163 IPR036869 -
Prci2g0605 439 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 37 394 - -
Prci2g0605 439 SUPERFAMILY HSP40/DnaJ peptide-binding domain 165 296 IPR008971 GO:0006457|GO:0051082
Prci2g0605 439 PRINTS DnaJ domain signature 90 110 IPR001623 -
Prci2g0605 439 PRINTS DnaJ domain signature 73 88 IPR001623 -
Prci2g0605 439 PRINTS DnaJ domain signature 55 73 IPR001623 -
Prci2g0605 439 CDD DnaJ_zf 193 249 IPR001305 GO:0031072|GO:0051082
Prci2g0605 439 SUPERFAMILY Chaperone J-domain 52 148 IPR036869 -
Prci2g0605 439 ProSitePatterns Nt-dnaJ domain signature. 95 114 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0605 Prci-Chr2 4410320 4418797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0605 49 119 C2H2 Transcription Factor Family AT1G74250 36.842 4.10e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0605 - - gmx:100809440 607.06