Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0603 ATGCGGAGGTTCAGTTGGTTAACGCCGCAGTATCGGCGTCAAGTTCTAGCATCTATGGCTTTGGAAGCGCCCGTTGATCAAGGAAAGTCCATTAGTAAATTATTGTCCTTTAGCCAATCGCTGTCTAGCAGACGAGCATTTCTTTCTTCTATTGAACGAGACTACTATCAAATTCTTGGTGTTCCTGAAACTGCCAGTCAGGACGATATCAAGAAGGCATTTCACAGGCTCGCTAAGAAGTACCATCCTGATGCAAATAAGAATAATCCATCTGCCAAGAGGAAATTTCAAGATGTAAGAGAAGCTTATGAGACCTTGAGAGATTCTAAAAAAAGGGCACATTTTGACAAGATGAGAACTTCTGATTCTGGGAACATAGAATATGAACGGGATGCCGAAGAACAGTTCAGAAATGCTCATAGGGCTCACTTTTCTGATTCATTTCACAAAATCTTCTCTGAGATGTTTGAAGAAGCAACAACTCATTCTGCATCAAATATTGAGGTCGAGATATCACTTTCTTTCTCAGAAGCTGTTAAGGGGTGCACCAAACGTGTGTCTTTTGATGCCATTGTTCCCTGTGATTTTTGCGATGGGCGAGGCTATTCACACAATGCAAAGGCAATTGTTTGTCCAACATGCAGGGGCGTAGGCAGAGTTACAATCCCTCCATTTACATCAACATGCATCACTTGTAGAGGATCAGGCCGAGTCATCAAGGACCATTGTAAATCTTGTGGAGGATCTGGGGTGGTAGAAGGCATCAAGGAGGTTAAAGTTACTGTACCAGCAGGTGTGGATTCAGGAGATACAATTCATGTGCCGGAAGCTGGACATGCTGCTGGACGTGGAGGTCAACCTGGAAGTCTATATATTAAAATAAAGGTGGCTAAGGATCCTGTTTTTGCCAGAGATGGTGCAGATATTTATGTGGAGTCTAACATCAGCTTTACACAAGCTATTCTTGGTGGTGAAGTTGAGGTGCCTACATTATCAGGAAAGATGCTAGTAAAAATACCTAAGGGCGTTCAACCAGGACAGCTTCTGATATTAAGGGGCAAAGGACTTCCAAAGCATGGTTTTCTTGTGGACCATGGAGACCAGCTCGTGCGCTTCCGTGTTAACTTCCCCGTTACAATTAATGAACGACAACGAGCCATCCTAGAAGAACTTGCAAAGGAGGAAATAAAGGAGGGATACAATTCACAGATTGAAGGAAATTGGTGGCAGCAAATTCTTGAACACGTCACGGGTCCAAAGTTTGTGTTGGAACTATCCATGCTGATGTTAATCCTCCTCTTCATCCATAAATTGTTGAGCTGA 1323 0.4316 MRRFSWLTPQYRRQVLASMALEAPVDQGKSISKLLSFSQSLSSRRAFLSSIERDYYQILGVPETASQDDIKKAFHRLAKKYHPDANKNNPSAKRKFQDVREAYETLRDSKKRAHFDKMRTSDSGNIEYERDAEEQFRNAHRAHFSDSFHKIFSEMFEEATTHSASNIEVEISLSFSEAVKGCTKRVSFDAIVPCDFCDGRGYSHNAKAIVCPTCRGVGRVTIPPFTSTCITCRGSGRVIKDHCKSCGGSGVVEGIKEVKVTVPAGVDSGDTIHVPEAGHAAGRGGQPGSLYIKIKVAKDPVFARDGADIYVESNISFTQAILGGEVEVPTLSGKMLVKIPKGVQPGQLLILRGKGLPKHGFLVDHGDQLVRFRVNFPVTINERQRAILEELAKEEIKEGYNSQIEGNWWQQILEHVTGPKFVLELSMLMLILLFIHKLLS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0603 440 Pfam DnaJ domain 54 116 IPR001623 -
Prci2g0603 440 ProSiteProfiles dnaJ domain profile. 54 119 IPR001623 -
Prci2g0603 440 ProSiteProfiles Zinc finger CR-type profile. 181 255 IPR001305 GO:0031072|GO:0051082
Prci2g0603 440 CDD DnaJ 54 108 IPR001623 -
Prci2g0603 440 Pfam DnaJ C terminal domain 167 377 IPR002939 -
Prci2g0603 440 CDD DnaJ_zf 194 250 IPR001305 GO:0031072|GO:0051082
Prci2g0603 440 Gene3D - 224 257 - -
Prci2g0603 440 Gene3D - 189 223 - -
Prci2g0603 440 Gene3D - 297 405 - -
Prci2g0603 440 Gene3D - 165 295 - -
Prci2g0603 440 FunFam Chaperone protein dnaJ 1, mitochondrial 297 404 - -
Prci2g0603 440 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 181 252 IPR036410 -
Prci2g0603 440 Hamap Chaperone protein DnaJ [dnaJ]. 51 407 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Prci2g0603 440 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 38 395 - -
Prci2g0603 440 SUPERFAMILY HSP40/DnaJ peptide-binding domain 301 388 IPR008971 GO:0006457|GO:0051082
Prci2g0603 440 SMART dnaj_3 53 111 IPR001623 -
Prci2g0603 440 Pfam DnaJ central domain 194 250 IPR001305 GO:0031072|GO:0051082
Prci2g0603 440 CDD DnaJ_C 165 377 - -
Prci2g0603 440 PRINTS DnaJ domain signature 74 89 IPR001623 -
Prci2g0603 440 PRINTS DnaJ domain signature 56 74 IPR001623 -
Prci2g0603 440 PRINTS DnaJ domain signature 91 111 IPR001623 -
Prci2g0603 440 SUPERFAMILY HSP40/DnaJ peptide-binding domain 166 297 IPR008971 GO:0006457|GO:0051082
Prci2g0603 440 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Prci2g0603 440 SUPERFAMILY Chaperone J-domain 53 149 IPR036869 -
Prci2g0603 440 Gene3D DnaJ domain 51 164 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0603 Prci-Chr2 4410320 4418801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0603 50 120 C2H2 Transcription Factor Family AT1G74250 36.842 4.15e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0603 - - gmx:100809440 602.438