Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0597 ATGGCCGCCCTTCTTCTCTCCCTCCTCCTCCTCCTTCGCTCCTCTTTCCCTTCCTTCGCACAGCTCACGTTTACCCCTCCTTCCTCTCCGCCTCTCGACTCACCATCCCAGGTTCGATTCGATAAATCCATGGCCATTGTTCTGGTCATTCTCCTCGTCGTCTTCTTCGCACTGGGCTTCCTCTCCGTCTGCTCTCGTCAATGTTCGGAGCGACGATTCCATGGAGGAACCGACCCCCTTGCTCCTCCTAGCGGGAGCAGCGAGCGCCACCCCCGCGGCCTCGACCCCGAAATCATCCGCACCTTCCCTACTCTCGTCTACTCCTCCGTCAAGGGTCTGAAAATTGGGAGGAGCTCCCTGGAATGTGCCGTCTGCTTGAACGAGTTTCAGGACCACGAAACTCTGCGTTTCATTCCCAAGTGCAGTCACGTCTTCCACCCCGGTTGCATCGACCTCTGGTTGTCCTCTCACTTTACGTGCCCCGTCTGTCGGGCCAACCTCGTTCCCAGACTAGGCGAAGTCTCCTTCGTCGCGGTTCAGATGCCCGAATCTCCCGCCGAATCTGAGCTACAACGACACGCCGGCGATATCATCCAACGTGATCAACAACTGGTAGAATCACCCTCCAAGAACAGAGATATGGTCAACCACAATCCTCCTCCGAGGTCGGGAACAGCGATCTTGTTTCCTCGATCACACTCGACTGGACATTCGCTGGTTTCGGCTGGGGAGGATCGGGAGAGATTTACTCTGAGATTACCGGAGGAGGTGAGGAAGGGGCTTCTGCACCCGGCATTGGAGAGATTGAGGAGTGAGAGAAGCGGTTACAGGACGAGAAGCGCGGGAAGTGGAGGTGGCCGGGAGCGGTTGGCCGGTTTCGAGCGGTTCAGGAGGGAGGGGCGGCCCGATCACTGGTCGGGGCTTCATCCACAGGAATGCTTCGAGTTCGTGGAGGGAGAGCAGCAGGAGGCACCATGCAGCCACGGAAAACTTGGAAGAAAGATCAACGGATCGGTTATGTCCAGACCCAAGTGA 1035 0.5758 MAALLLSLLLLLRSSFPSFAQLTFTPPSSPPLDSPSQVRFDKSMAIVLVILLVVFFALGFLSVCSRQCSERRFHGGTDPLAPPSGSSERHPRGLDPEIIRTFPTLVYSSVKGLKIGRSSLECAVCLNEFQDHETLRFIPKCSHVFHPGCIDLWLSSHFTCPVCRANLVPRLGEVSFVAVQMPESPAESELQRHAGDIIQRDQQLVESPSKNRDMVNHNPPPRSGTAILFPRSHSTGHSLVSAGEDRERFTLRLPEEVRKGLLHPALERLRSERSGYRTRSAGSGGGRERLAGFERFRREGRPDHWSGLHPQECFEFVEGEQQEAPCSHGKLGRKINGSVMSRPK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0597 344 MobiDBLite consensus disorder prediction 325 344 - -
Prci2g0597 344 SUPERFAMILY RING/U-box 117 171 - -
Prci2g0597 344 FunFam E3 ubiquitin-protein ligase ATL6 84 170 - -
Prci2g0597 344 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
Prci2g0597 344 MobiDBLite consensus disorder prediction 75 94 - -
Prci2g0597 344 Pfam Ring finger domain 121 164 IPR001841 -
Prci2g0597 344 CDD RING-H2_EL5-like 121 164 - -
Prci2g0597 344 PANTHER RING FINGER DOMAIN-CONTAINING 24 178 - -
Prci2g0597 344 SMART ring_2 122 163 IPR001841 -
Prci2g0597 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 170 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0597 Prci-Chr2 4364625 4366028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0597 1 262 Rapid Response to Elicitors AT3G05200 39.273 2.37e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0597 K10664 - qsa:O6P43_019600 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0597 2 4364625 4366028 Prci15g0224 15 1525937 1529309 CCT
Prci2g0597 2 4364625 4366028 Prci2g0597 2 4364625 4366028 ECH