Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0580 ATGTTGGCCGCTGTCGCTCTTTCGCCTCGCGAAGAGTTCGTCTACATGGCGAAGCTTGCCGAACAGGCCGAACGCTACGAAGAGATGGTCGAGTTCATGGAGAAGGTCTCCGCCGCCGTCGACAAAGACGAGCTCACCGTCGAAGAGAGGAATCTCCTCTCCGTCGCCTACAAGAACGTCATCGGTGCCCGCCGTGCCTCCTGGCGTATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGAAACGAGGATCATGTCTCCATGATCCGCGACTACCGATCCAAGATCGAGAGTGAGCTCTCCAACATCTGCGATGGGATCCTGAAGCTCCTCGATACCCGCCTTATCCCTTCTGCTTCTGCCGGCGATTCCAGGGTCTTTTATCTCAAGATGAAGGGCGATTACCATAGGTACCTTGCCGAGTTCAAGACCGGAAACGAGCGTAAGGAGGCTGCCGAGAGCACTCTTACTGCTTACAAATCTGCTCAGGACATTGCAAATGCCGAACTGCCTCCGACTCATCCAATCAGACTTGGTCTTGCTTTGAACTTTTCTGTGTTCTACTATGAGATTCTCAACTCTCCGGACCGTGCTTGCAACCTTGCAAAGCAGGCCTTTGATGAAGCAATCGCTGAATTGGATACGTTGGGAGAGGAATCATACAAGGATAGCACGTTGATCATGCAACTTCTTCGTGATAACCTTACCCTATGGACCTCTGACATGCAGGATGAGGGAGCGGACGAAATTAAAGAAGCAGCAGCTGCTCCTAAACCTGACGAGGAAAAGCAGTAA 798 0.5226 MLAAVALSPREEFVYMAKLAEQAERYEEMVEFMEKVSAAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSMIRDYRSKIESELSNICDGILKLLDTRLIPSASAGDSRVFYLKMKGDYHRYLAEFKTGNERKEAAESTLTAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDEGADEIKEAAAAPKPDEEKQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0580 265 PRINTS 14-3-3 protein zeta signature 44 73 IPR000308 -
Prci2g0580 265 PRINTS 14-3-3 protein zeta signature 93 117 IPR000308 -
Prci2g0580 265 PRINTS 14-3-3 protein zeta signature 213 242 IPR000308 -
Prci2g0580 265 PRINTS 14-3-3 protein zeta signature 124 146 IPR000308 -
Prci2g0580 265 PRINTS 14-3-3 protein zeta signature 186 212 IPR000308 -
Prci2g0580 265 PRINTS 14-3-3 protein zeta signature 159 185 IPR000308 -
Prci2g0580 265 ProSitePatterns 14-3-3 proteins signature 1. 50 60 IPR023409 -
Prci2g0580 265 Gene3D - 2 253 IPR036815 -
Prci2g0580 265 PANTHER 14-3-3 PROTEIN 10 244 IPR000308 -
Prci2g0580 265 Pfam 14-3-3 protein 16 240 IPR023410 -
Prci2g0580 265 SMART 1433_4 10 253 IPR023410 -
Prci2g0580 265 FunFam 14-3-3 protein epsilon 7 253 - -
Prci2g0580 265 Coils Coil 16 36 - -
Prci2g0580 265 PIRSF 14-3-3 5 252 IPR000308 -
Prci2g0580 265 SUPERFAMILY 14-3-3 protein 8 242 IPR036815 -
Prci2g0580 265 ProSitePatterns 14-3-3 proteins signature 2. 222 241 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0580 Prci-Chr2 4213484 4215677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0580 8 265 14-3-3 family AT1G78300 91.085 1.54e-175 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0580 K06630 - qsa:O6P43_015326 450.669