Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0535 ATGACGAACCACAATGTGAAGGCTCCTGATCTCCAGTCTCAAATTAACGCCGTTATTGCGCTGTTGATGTCCATTTCCAATTCACCTTTGTTGCCCGGAGCGGGTATCCCGGAATCCATGGCTCTGCTTCGTCAGTTTCTGGGGACATCCCAGAAAAAGCTCATCAAAAGGCTCCAGGACAGAGATGGCAAAGGAGGAGCCAAAGTTACCTCCTGGGTTGATTCAATGAGAGCTTCCTCTCCTCCCCGAGTCAAATCAACCGTCCACGCCTGTGAAGACTCAGACATAAGTTCTGGGATTCTCCATCATCCTTCAGCGCTCAACGTGTTTGAGCAGATAATATCTAAATCAAGAGGGAAAAAGATCATCACCTTTCTTGACTACGATGGAACTCTCTCCCCAATTGTTGCAGACCCCGAGAAAGCATTCATGACCGAAAAGATGAGAGAAACGGTGAAGGACATAGCCAGACATTTTCCCACGGCCATCGTGACTGGGAGGTGCATAGACAAGGTATATAACTTTGTAAGACTGGCAGAACTGTATTACGCAGGCAGCCATGGCATGGACATCAAGGGGCCAACGAAAACACGAAACTCTGAGAAAGGTAAACGAGCAGTCCTCTTCCAGCCTGCGAGTCACTTCTTGCCCATGATGGACGAGGTGTATAAACTGCTAGTAGGAAAAACAAAGTCTGTTCCCGGGGCCATCGTAGAGAATAACAAGTTTTGCTTGTCCGTGCACTACCGTTGTGTTGACGAGAAGAGTTGGGGTGCATTGGCAGAGCAAGTTAGATCAGTGCTCAACGATTATCCAAAACTTAGACTCACCCAAGGAAGAAAAGTTTTAGAGATCCGTCCAAACATCAAATGGGACAAGGGCAAAGCTCTCGAGTTTTTGCTGCGATCACTAGGTTATGCAAATTCTAAAGACGTATTTCCGATTTACATCGGTGATGACCGAACTGATGAGGATGCTTTTAAGGTTTTGCGCAACAGAGGTCAAGGGATTGGGATTCTAGTTTCAAAAGTTCCAAGAGAAACAGAGGCTTCCTACACTTTGCAAGACCCATCAGAAGTCGAGCATTTTCTAAGGCGTTTGGTGGAGTGGAAGAGAAGGAGGGTCAATCCAGCAAGTGTAGAGGCCTTTAGATTGTAG 1158 0.468 MTNHNVKAPDLQSQINAVIALLMSISNSPLLPGAGIPESMALLRQFLGTSQKKLIKRLQDRDGKGGAKVTSWVDSMRASSPPRVKSTVHACEDSDISSGILHHPSALNVFEQIISKSRGKKIITFLDYDGTLSPIVADPEKAFMTEKMRETVKDIARHFPTAIVTGRCIDKVYNFVRLAELYYAGSHGMDIKGPTKTRNSEKGKRAVLFQPASHFLPMMDEVYKLLVGKTKSVPGAIVENNKFCLSVHYRCVDEKSWGALAEQVRSVLNDYPKLRLTQGRKVLEIRPNIKWDKGKALEFLLRSLGYANSKDVFPIYIGDDRTDEDAFKVLRNRGQGIGILVSKVPRETEASYTLQDPSEVEHFLRRLVEWKRRRVNPASVEAFRL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0535 385 FunFam Trehalose 6-phosphate phosphatase 212 288 - -
Prci2g0535 385 Gene3D - 212 288 - -
Prci2g0535 385 CDD HAD_TPP 125 360 - -
Prci2g0535 385 Pfam Trehalose-phosphatase 125 358 IPR003337 GO:0003824|GO:0005992
Prci2g0535 385 Gene3D - 125 354 IPR023214 -
Prci2g0535 385 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 50 375 IPR044651 GO:0004805|GO:0005992
Prci2g0535 385 FunFam Trehalose 6-phosphate phosphatase 218 376 - -
Prci2g0535 385 NCBIfam trehalose-phosphatase 120 368 IPR003337 GO:0003824|GO:0005992
Prci2g0535 385 NCBIfam HAD-IIB family hydrolase 125 332 IPR006379 -
Prci2g0535 385 SUPERFAMILY HAD-like 125 371 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0535 Prci-Chr2 3907456 3909775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0535 125 367 Trehalose Biosynthesis Gene Families AT1G70290 27.027 2.49e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0535 K01087 - gmx:100788641 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0535 2 3907456 3909775 Prci15g0580 15 3766580 3768971 CCT