Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0534 ATGTTCAAGGGCCTCCGCTCCCTGATTCGGAAGAGCACTTCGCATTGTCGTCGGCTCCCGCTCTCGTTTTCAATCTCCCTCTTCTCCTCCACTCCCTCCAAACACGCTAGTTCCAGTCCTTCCATTAAAATGTTCGATTACTTGCTCACTCGACAGAATTTCTCCCCAGAGGCTGCTGAGAAAGCCTCGTCCACCGTTAAGCAGGTCAGAAATCTCCAACGGGCAGATTCTGTATTGTCGTTCTTTAAGCAAATTGGTTTTTCCCAGAATCATATTGAAGACCTTGTCGGAAGATTTCCTGAAGTTCTCTCCGCCGGCCTTGACAACGTTCTAAGACCCAAAATCAAAGTTTTCCTGGACTTGGGCTTCAACCCCGTTGATATGGCTGATCTTCTATCTAATGATCCATTGCTTCTCAGGCGGAGCGCCGAAAATCGACTCAGGCCGTCACTGACGGTGTTGTTGAATATTTTGGGTTCAACCGAAGAAGTTTGTAGGCTCTTAAAGTTATCTAATTGGTTTCTGAAACAAGATATAGAGAAGATTATGTTGCCCAATATTGAATACTTGAAAGGTATTGGAATATGCTCTTCACAAATTGTTAGATACTTATTCCACTACCCTAGGTTTTTCCTACTTAAACAGGAGAGCATATCGGTATACGTGAGCAGAGTAGATGAGATGGGCTTTGATAGGAAATCCAATATGTACCTTCCTGCCATAAGAGTAATAAGTTCAATGTCTTTAGAGAGATGGCATTTGAAGCTGAATGTGTTCCGGAGCTTGGGGCTTTCTGAAAATGATATTCTAGTTTTGTTTAGGAGGATGCCCATTGCATTTGCTGTATCCACAAGGAAAGTTCAGGAGGTGACGGAGCTGCTACTTAGTTCAGGAAAGTGCGATATGTCATATATAGTTTTGCACCCAGAGTTGCTTTATGCAGCGTTGAACGCAGGTTGA 960 0.4375 MFKGLRSLIRKSTSHCRRLPLSFSISLFSSTPSKHASSSPSIKMFDYLLTRQNFSPEAAEKASSTVKQVRNLQRADSVLSFFKQIGFSQNHIEDLVGRFPEVLSAGLDNVLRPKIKVFLDLGFNPVDMADLLSNDPLLLRRSAENRLRPSLTVLLNILGSTEEVCRLLKLSNWFLKQDIEKIMLPNIEYLKGIGICSSQIVRYLFHYPRFFLLKQESISVYVSRVDEMGFDRKSNMYLPAIRVISSMSLERWHLKLNVFRSLGLSENDILVLFRRMPIAFAVSTRKVQEVTELLLSSGKCDMSYIVLHPELLYAALNAG 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0534 319 Gene3D Transcription termination factor 3, mitochondrial 144 318 IPR038538 -
Prci2g0534 319 PANTHER CGI-12 PROTEIN-RELATED 38 312 IPR003690 GO:0003690|GO:0006355
Prci2g0534 319 Pfam mTERF 44 217 IPR003690 GO:0003690|GO:0006355
Prci2g0534 319 Pfam mTERF 79 295 IPR003690 GO:0003690|GO:0006355
Prci2g0534 319 SMART mt_12 129 161 IPR003690 GO:0003690|GO:0006355
Prci2g0534 319 SMART mt_12 235 265 IPR003690 GO:0003690|GO:0006355
Prci2g0534 319 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Prci2g0534 319 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Prci2g0534 319 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0534 Prci-Chr2 3896110 3897824 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci2g0534 mTERF 3.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0534 K15031 - qsa:O6P43_019665 343.199