Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0532 ATGGCAGCTACAATGGATTTCTACAGCAGCAGACCACTTCTGTCAGATCCTTTCAGGGGTGAACTAATGGAAGTTCTTGAACCTTTTATGAAGAGTCCTTCCACAACTACCTCCCCCTCCGCAGTTTCATCCCAATACTCTAATTCCCCTCTCCCCTCTACATCTTACTCTGCTTCTTCTCCCACCTCCTTCCTATCTTCTCCATCAGTCCCTTCACAGCCCAGTTTTGTGGCAGACGGTTGCTCTGCATCGATGACTCCCATATTTAGCGATGGGTTATCGAACAGCCTCGCCGCAAGCGGCCTCGGGCAACACAGTTCGATACTTGGGCTCAACCACCTGACTCCGTCTCAGATTAACCAGATCCAAGCCCGGATCCAGATCCAGAACCATCAAAACCTTTGCTGGCAGCAAAATAGTGCCACTCTCGGCTTCTTGAGTCCCAAACCTATTCCTATGAAGCACGCGGGCGTGCCTCCCAAGCCCACCAAGCTCTACAGAGGTGTGAGGCAACGTCACTGGGGAAAGTGGGTTGCCGAGATCAGGCTCCCTAAGAACCGCACTCGACTGTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCCCTAGCCTATGACAAGGCCGCTTACAAGCTCAGAGGTGACTTTGCCAGGCTCAACTTTCCCAACCTGCGACACCAAGGTTCCTGTGTCGGCGGCGAATTCGGGGAATACAAGCCGCTCCATTCCGCTGTGGACGCCAAGCTTCAAGCAATTTGCGAGAGCTTGGCCGATCTGCAGAAACAGGGCAAGTCAGGAAAGCCAACGAGCTCATCCAAGAGGTCAGGGGGGCGGTCGAAGTCGGGTTCGAAAGATGCGCAGTCGGCAGCCAGCGAGGCGGATGTGAAAGTTGAAAGCTCCTCCTCACCGGCGATGACGGAGAGCGAGGGATCTGGGGGATCTTCGCCCCTGTCGGATCTGACTTTTGCGGACGTGAGCGAGCCACAGTGGGACGGCGCGTTGGATAATTTGAGTCTACAGAAGTACCCTTCTTACGAGATTGACTGGGCATCTCTGTGA 1059 0.5496 MAATMDFYSSRPLLSDPFRGELMEVLEPFMKSPSTTTSPSAVSSQYSNSPLPSTSYSASSPTSFLSSPSVPSQPSFVADGCSASMTPIFSDGLSNSLAASGLGQHSSILGLNHLTPSQINQIQARIQIQNHQNLCWQQNSATLGFLSPKPIPMKHAGVPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSCVGGEFGEYKPLHSAVDAKLQAICESLADLQKQGKSGKPTSSSKRSGGRSKSGSKDAQSAASEADVKVESSSSPAMTESEGSGGSSPLSDLTFADVSEPQWDGALDNLSLQKYPSYEIDWASL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0532 352 CDD AP2 164 224 IPR001471 GO:0003700|GO:0006355
Prci2g0532 352 MobiDBLite consensus disorder prediction 260 324 - -
Prci2g0532 352 FunFam Ethylene-responsive transcription factor 2 164 223 - -
Prci2g0532 352 PRINTS Ethylene responsive element binding protein signature 166 177 IPR001471 GO:0003700|GO:0006355
Prci2g0532 352 PRINTS Ethylene responsive element binding protein signature 188 204 IPR001471 GO:0003700|GO:0006355
Prci2g0532 352 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 352 - -
Prci2g0532 352 Pfam AP2 domain 166 214 IPR001471 GO:0003700|GO:0006355
Prci2g0532 352 Gene3D AP2/ERF domain 165 223 IPR036955 GO:0003700|GO:0006355
Prci2g0532 352 ProSiteProfiles AP2/ERF domain profile. 165 222 IPR001471 GO:0003700|GO:0006355
Prci2g0532 352 MobiDBLite consensus disorder prediction 262 322 - -
Prci2g0532 352 SMART rav1_2 165 228 IPR001471 GO:0003700|GO:0006355
Prci2g0532 352 SUPERFAMILY DNA-binding domain 165 223 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0532 Prci-Chr2 3871493 3873462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0532 1 352 AP2-EREBP Transcription Factor Family AT1G78080 52.174 2.41e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci2g0532 AP2 8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0532 K09286 - qsa:O6P43_015285 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0532 2 3871493 3873462 Prci15g0579 15 3747656 3749558 CCT