Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0523 ATGGGGAGTTCAAGAGAAATTGCAATTGGGCCAGTGGCCGTAGTATCATTGCTGCTATCTTCCCTGCTCTCGCAAGTGCAAGATCCCGTTGCCAACCCCGATGCCTACAGAAACCTTGCCTTCACAGTGACCTTCTTTGCCGGAATGTTTCAAGCAACATTTGGAATTTTTAGGTTGGGATTTCTTGTGGATTTTCTTTCCCATGCCGCGTTGGTTGGATTCATGGCAGGTGCGGCGATCATGATTGGTCTTCAGCAACTCAAGGGGTTGCTGGGGATCACACACTTCACCAACAAAACTGATGCAGTATCTGTTTTGGAGTCCGTTTATAAGTCACTTCATCAACAGATCACCTCAGGTTCTGCAGATAAATGGCACCCTTGGAATTTTGTCGTGGGATGCTCGTTCATGGTTTTCCTTCTCATTAGCCGGCTTGTTGGAAGAAGAAGCAAAAAGTTTTTCTGGTTGCCGGCTATTTCTCCTCTTCTATCGGTTATACTATCAACTTTGATTGTATATTTGACAAGAGCCGATAAGCACGGGGTTAATATAATAAAGCGCGTCAAAGGAGGCCTGAATCCAAGTTCAGCTCACCTTTTACAATTTCAGGGCCAACAAGTTGGACAGACAGCTAAAATTGGCTTGATTTCCGCCGTCATTGCTCTCACTGAATCTATAGCTGTCGGCCGATCTTTCGCTTCCATTAAAGGTTACAATCTTGATGGCAACAAAGAAATGCTAGCAATGGGGTTCACGAACATCGCAGGCTCTTTAACTTCATGCTATGTGGCAACTGGATCTTTCTCAAGGACTGCAGTGAATTTCAGTGCAGGATGTCAAACGGCCATATCAAACATTGTGATGGCAGTCACCGTGCTCGTGTCTCTAGAATTGCTTACGAGGCTCTTGTACTACACTCCAGTGGCTATACTTGCTTCCATCATCATTTCGGCCCTTCCCGGACTTATTGACATAAACGAAGTTTATCACATATGGAAGGTTGACAAATTCGACTTTCTTGCCTGCATAGGTGCTTTCCTCGGCGTCTTGTTTAAATCAGTAGAGACTGGGCTTCTTGTTGCCGTAATCATCTCGTTTGCAAAGATACTGATACAATCAATTCGACCTGGAATAGAAGTTCTGGGCAGAGTTCCAAGGACAGAAGCATTTTGTGATGTTAGTCAATATCCCATGGCCATAAGCACTCCTGGCATCTCTGTTATTCGCATAAGCTCTGGCTCACTTTGCTTCGCAAATGCAAACTTCGTCGGAGAAAGAATACTGAAATGGGTCACAGAAGAAGATAAGACTCAACAAGCAAGGGTGCGCGCAGTGATCCTGGACATGACGAACCTGATGAACGTGGATACTTCTGGAATTTTGGCAATGGAGGAGCTGCACAGGAGGTTGCAATCCCGTGGCGTGGAGCTAGTTATGGTGAACCCAAGGTGGCAAGTCATTCACAAGCTGAAAGTGGCGCAATTTGTGGAGAAGATCGGAGAAGAAAGGGTTTTCCTTACAGTGGGTGAAGCTGTTGACGCGTGTGGGTCTACTAAATTTTTGGCCCCTTGA 1572 0.4567 MGSSREIAIGPVAVVSLLLSSLLSQVQDPVANPDAYRNLAFTVTFFAGMFQATFGIFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGITHFTNKTDAVSVLESVYKSLHQQITSGSADKWHPWNFVVGCSFMVFLLISRLVGRRSKKFFWLPAISPLLSVILSTLIVYLTRADKHGVNIIKRVKGGLNPSSAHLLQFQGQQVGQTAKIGLISAVIALTESIAVGRSFASIKGYNLDGNKEMLAMGFTNIAGSLTSCYVATGSFSRTAVNFSAGCQTAISNIVMAVTVLVSLELLTRLLYYTPVAILASIIISALPGLIDINEVYHIWKVDKFDFLACIGAFLGVLFKSVETGLLVAVIISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMAISTPGISVIRISSGSLCFANANFVGERILKWVTEEDKTQQARVRAVILDMTNLMNVDTSGILAMEELHRRLQSRGVELVMVNPRWQVIHKLKVAQFVEKIGEERVFLTVGEAVDACGSTKFLAP 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0523 523 PANTHER SULFATE TRANSPORTER 1 515 IPR001902 GO:0016020|GO:0055085
Prci2g0523 523 ProSiteProfiles STAS domain profile. 412 515 IPR002645 -
Prci2g0523 523 Pfam STAS domain 396 511 IPR002645 -
Prci2g0523 523 Pfam Sulfate permease family 1 343 IPR011547 GO:0016020
Prci2g0523 523 SUPERFAMILY SpoIIaa-like 402 515 IPR036513 -
Prci2g0523 523 Gene3D STAS domain 375 518 IPR036513 -
Prci2g0523 523 FunFam Sulfate transporter 31 375 518 - -
Prci2g0523 523 CDD STAS_SulP_like_sulfate_transporter 396 508 - -
Prci2g0523 523 NCBIfam sulfate permease 1 511 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0523 Prci-Chr2 3777611 3782169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0523 1 515 Inorganic Solute Cotransporters AT5G10180 65.451 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0523 K17469 - gmx:100805269 805.823