Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0480 ATGCATCATCTACCTCGGTTTTTGGGTCTCAGAAAGCAAAACAAGGGCATGGACTCGAATAAAGCCCGAAGAAAACCCCGGCTCGATCGCCGCAATGCCGTCAAGTACGCTGAGTATGATGCTGGGTCATCTTCGTCGTCTCTAGACAACTCCTGTGGATCCCTCTACACACGATCAACGGAGTTCTGTGATCGAACCAGCTTCCGAATCGCGGGAGGTGAGGGTGAGGTTGATCGCATATGCAGAGATTTGGGGCTTTCAGGACCTGAAGACTTCGCCATTCCTGCGGCGGCTTGGGAGGCTATGAAAATTAGCTCGTCTTCGGATATTACGCTAAGTTCGAAGGCGGACGAGCTAGATGGTCAGGAGAACGAGGAATTACAGGACGAGAGTCCAGTAGTGGGTAAATTAGGTTACAAACTCGAAGAAAGGGTTACGGGTAGATGTATAGCTGAGTCAACTCAAGGCGAGCCTGCTGAGACTAGTGGGTGCTGCATTGCTGGTGATGGTGTTTGTGGAACCAGTGTCGGAGTAGGTATAAAAGGAATCCGTCCGCCGATGTTAAACCCACCGCCTGGAGCGAGGCTACCGGTTATTGATAACACTTGCTCTACTTGGGATATTTTAAGGGATTTAGCTCCGCAAGATGAAAGACAACCTTCAGGAAATGACGGGGAGTTGAACTTTTCCGATAATAATGAAGTAATACGCAGGGAAGCGGGGCGAGGAGAAGTAAATAAAGAGGAAAAAGAAGAACCGGTAGTTGAAGGCAAGGTAAGTCCGAGAGGAGAAGAGGATGTTAATGCAGCAAGGATTGCGGAGATCGTTGCTCAGTTATCCGCATCGTGTTCATTCACCACGTCAAACGAAGATGATTCTTCTAGCAGTTTCACGGATCCTCCATCGAATAATATATCTCCCAACGGAAGATTCAGGCGCAGAATTACGAACTGGGAAAAGGGTGAGCTTTTGGGACGTGGTTCGTTCGGATCAGTCTATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAGGAAGTTTCACTGCTTGATCAAGATGACCAGGGAAGGCAAAGTGTCTGTTGCCTGGAGCAGGAAATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACTATGGCACAGAAATGGATCAATCAAAGCTGTATATCTTTCTTGAGCTTGTGACTAAAGGTTCCCTTGCAAACCTTTATCGGCGGTACAATCTTCGAGACTCCCAAGTATCTGCCTACACGAGACAGATTCTACATGGTTTAAAGTATCTTCATGATCGAAATGTGATTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATATCAAGTCGTGCAAGGGGACAGCATTCTGGATGGCACCTGAGGTTGTGAAAGGAAAAAATCAAGGTTATGGACTTCCGGCTGATATATGGAGTCTAGGGTGCACTGTGTTGGAGATGTTAACAGGCCAAATTCCGTACTCTCATTTGGAATGTATGCAGGCTTTGTTTAGAATCGGAAAGGGTGAGCGTCCTCTTGTTCCTGACTCTCTTTCAAGAGATGCACAAGATTTTATCCTGCAGTGCCTTCAAGTCAATCCTGATGATCGTCCCACCGCTGCTCAGCTTTTAAACCATCAATTCGTCCAAAGGCCACTTTCCACATTCTCTGGCCCTGCATCTCCTTTTATACCTGCCAGAAGGGGATGA 1776 0.4611 MHHLPRFLGLRKQNKGMDSNKARRKPRLDRRNAVKYAEYDAGSSSSSLDNSCGSLYTRSTEFCDRTSFRIAGGEGEVDRICRDLGLSGPEDFAIPAAAWEAMKISSSSDITLSSKADELDGQENEELQDESPVVGKLGYKLEERVTGRCIAESTQGEPAETSGCCIAGDGVCGTSVGVGIKGIRPPMLNPPPGARLPVIDNTCSTWDILRDLAPQDERQPSGNDGELNFSDNNEVIRREAGRGEVNKEEKEEPVVEGKVSPRGEEDVNAARIAEIVAQLSASCSFTTSNEDDSSSSFTDPPSNNISPNGRFRRRITNWEKGELLGRGSFGSVYEGISEDGFFFAVKEVSLLDQDDQGRQSVCCLEQEIALLSQFEHENIVQYYGTEMDQSKLYIFLELVTKGSLANLYRRYNLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDANGSVKLADFGLAKATKLNDIKSCKGTAFWMAPEVVKGKNQGYGLPADIWSLGCTVLEMLTGQIPYSHLECMQALFRIGKGERPLVPDSLSRDAQDFILQCLQVNPDDRPTAAQLLNHQFVQRPLSTFSGPASPFIPARRG 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0480 591 MobiDBLite consensus disorder prediction 231 263 - -
Prci2g0480 591 ProSiteProfiles Protein kinase domain profile. 318 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0480 591 Pfam Protein kinase domain 319 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0480 591 MobiDBLite consensus disorder prediction 215 263 - -
Prci2g0480 591 MobiDBLite consensus disorder prediction 1 29 - -
Prci2g0480 591 SMART serkin_6 318 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0480 591 SUPERFAMILY Protein kinase-like (PK-like) 292 579 IPR011009 -
Prci2g0480 591 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Prci2g0480 591 Gene3D Transferase(Phosphotransferase) domain 1 315 581 - -
Prci2g0480 591 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 161 577 - -
Prci2g0480 591 MobiDBLite consensus disorder prediction 287 310 - -
Prci2g0480 591 FunFam Mitogen-activated protein kinase 1, putative, expressed 316 583 - -
Prci2g0480 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0480 Prci-Chr2 3541037 3553446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0480 4 575 MAP Kinase Kinase Kinase AT4G08500 50.404 2.29e-173 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci2g0480 Pkinase 2.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0480 K13414 - qsa:O6P43_019713 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0480 2 3541037 3553446 Prci15g0529 15 3423392 3430406 CCT
Prci2g0480 2 3541037 3553446 Prci2g0480 2 3541037 3553446 ECH