Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0476 ATGGGGGCGTCCATCGAAATCCGTCAATACGCCGGCCCAATAAACGGCGTAGCTACTTCCTTCAACGACTCCCCAGCCAATCCCAAGAGATCCGAGCCCACGTCAAGGGAGTACGATTCCTCCAGCGAAGATGAAAACGACGCCCAAGAGTGGAAGGACGTAATCCGAAAGGTGAACTCCGAAGCCGAGTGCTGGATCGAACGCAATGCTTCCATGCTGCGTGTCCCTGGAAAACACTACTACAACTGGGAGTCACCCATCAGCCGCCTCATGCATCACGGCTTCATCACCCCCACGCCCCTCCACTTTGTACGTAACCACGGCCCCGTCCCAGATGACCTCTGGCATGACTGGACCGTCCAGGTTTGTGGCCTCGTCAAACGCCCCGCCAAGTTCACCATGGACCAACTCGTCAACGACTTCCCCAGCCGTGAGCTCCCCGTCACACTGGTGTGTGCCGGCAACAGAAGGACAGAACAGACCAATGTGAAGCAAAGCATTGGTTTTAGCTGGCGTGTGGGTGCGATTTCCACTTCCGTCTGGCGGGGGGTGCCTTTGAGGTACTTGCTCAAGAGGTGCGGCATCTATAGCCGTACCAAAGGGGCTTTATACGTGTGCCTCGAAGGGGACGAGGATCTTCCAGGTGGCGGTGGGACCAAGTACGAGACAAGCATCCGGAGAGACATTGCGATGGATCCGACCCGCGACATCATCATCGCTTACATGCAAAACAGGGAGCGCTTGGCACCTGATTGCGGGTTCCCGGTGAGGATAATCATACCGGGTTTCATAGGGGGCCGCATGGTTAAGTGGCTCAAGCGTATCATTGTCACTCCACAAGAATCAAGCAACCATTACCATTATGTGGACAATAGAGTGCTCCCCACCCACGTGGATGCCGAGCTGGCCAGCTCTCAAGGTTGGTGGTACAAGCCTGAGACTGCTGTCTACGAGCTCAACATAAACTCCGTGATAACCACGCCGCGTCATGAGGAAATCTTGCCGATAAACTACTGGACTACTCAGAGGCCGTTTGTATTTAAAGGCTACGCATATAACGGGGGCGGGAAAAAAGTAACACGTGTCGAGGTAACAATGAACGGTGGGGAAACATGGCTACTGGCCAAATTAGAACACCCAGAAAAGCCGAACAAATACGGGAAATACTGGTGCTGGTGTTTCTGGTCGTTGGAGGTGCAAGTGCTGGACCTTCTGGGAGCCAAGGAAATCGCTGTACGAGCATGGGACGAGGCCTTCAACACCCAACCCGAGAAGCTTATTTGGAATCTCAAGGGTATGATGAACAACTGCTGGTTCAAAGTGAAAACCAATGTGTGCATGCCCCATAAAGGCGGTACTGGAATTGTGTTTGAACACCCAACCATACAAGAAAACCATTCTGGTGGGCCAATGAAAACATCAGAGTCTAACCAGAGCATCAAGAAGAGTGCCGCGACATCCCTCATGAACACCATATTAACTATGTACTCCATCACCGAAGTCAAAACGCACACCTCCCCCGACTCTGCCTGGATCATCGTTCAAGGCTATGTGTACGACTGCACCCGCTTCCTCAAAGAACACCCAGGCGGGGCCGAAACCATCCTCAACAACGCTGGCACCGACTGCACTGAAGAGTTCGAGGCCATCCATTCTGACGAAGCCAAGAAAATGCTCGAGGACTACAGAATCGGCGAGCTCATACCTACCGGCTTCAACTCCACTGACTCGTCGCCCAACCCCTTCGTGCACAGCAATGCCGACATCAGTCACACAATCCCAATCAAAGAGGCCAACCAATTACGCAGCGTGGCCCTAAACCCGAATGAGAAAATCCCATGCAAGCTCGTGTCCAAAAAGTCCATCTCACACGACGTGAGGCTTTTCCGTTTTGCGCTACCCTCCGTGGACCAAGCCATGGGCCTGCCCGTCGGAAAGCATGTATTTGTGAGTGCAACCATTGATGATAAATTGTGCAAGCGACCTTACACTCCAACCAGCAGCATCGATGAAATTGGGTATTTCGATCTGGTGGTCAAGATTTACTTCAAAGGGGTACACCCCAAGTTCCCCAACGGTGGGCTAATGTCCCAGCACCTGGACTCGCTTCCTATTGGCACCGTCGTGGAAGTGAAGGGTCCACTAGGCCACATAGAGTACACCGGAAGAGGTAAATTTTTGGTTCACGGGAAGCCCAAGTTTGCGAAGAGGCTGACCATGCTGGCCGGCGGGAGCGGGATCACGCCCATTTATCAAGTGGCTCAAGCTATTCTGAAGGATCCAGAGGATCGGACCGAGATGATCGTTGTGTATGCGAACCGGACTGAGGATGATATTCTGCTGAGAGAAGAGATGGATGCGTGGGCTAAGAAGGATGAGCGGTTCAGAGTGTGGTACGTGGTGCAGGAAAGCAAGAGCGAAGTGTGGGAATACAGTGTGGGTTTCATCACGGAGGATATCCTGAGGGAGCATGCTTTGGAGGCATCGGACGACACGCTGGCATTGGCTTGTGGGCCACCACCAATGATTCAGTTCGCGGTGCAGCCCAATTTGGAGAAGATGGGGTATGATATCAACAACAATTTGCTTGTGTTTTAG 2598 0.5285 MGASIEIRQYAGPINGVATSFNDSPANPKRSEPTSREYDSSSEDENDAQEWKDVIRKVNSEAECWIERNASMLRVPGKHYYNWESPISRLMHHGFITPTPLHFVRNHGPVPDDLWHDWTVQVCGLVKRPAKFTMDQLVNDFPSRELPVTLVCAGNRRTEQTNVKQSIGFSWRVGAISTSVWRGVPLRYLLKRCGIYSRTKGALYVCLEGDEDLPGGGGTKYETSIRRDIAMDPTRDIIIAYMQNRERLAPDCGFPVRIIIPGFIGGRMVKWLKRIIVTPQESSNHYHYVDNRVLPTHVDAELASSQGWWYKPETAVYELNINSVITTPRHEEILPINYWTTQRPFVFKGYAYNGGGKKVTRVEVTMNGGETWLLAKLEHPEKPNKYGKYWCWCFWSLEVQVLDLLGAKEIAVRAWDEAFNTQPEKLIWNLKGMMNNCWFKVKTNVCMPHKGGTGIVFEHPTIQENHSGGPMKTSESNQSIKKSAATSLMNTILTMYSITEVKTHTSPDSAWIIVQGYVYDCTRFLKEHPGGAETILNNAGTDCTEEFEAIHSDEAKKMLEDYRIGELIPTGFNSTDSSPNPFVHSNADISHTIPIKEANQLRSVALNPNEKIPCKLVSKKSISHDVRLFRFALPSVDQAMGLPVGKHVFVSATIDDKLCKRPYTPTSSIDEIGYFDLVVKIYFKGVHPKFPNGGLMSQHLDSLPIGTVVEVKGPLGHIEYTGRGKFLVHGKPKFAKRLTMLAGGSGITPIYQVAQAILKDPEDRTEMIVVYANRTEDDILLREEMDAWAKKDERFRVWYVVQESKSEVWEYSVGFITEDILREHALEASDDTLALACGPPPMIQFAVQPNLEKMGYDINNNLLVF 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0476 865 Gene3D - 716 865 IPR039261 -
Prci2g0476 865 FunFam Nitrate reductase 59 308 - -
Prci2g0476 865 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 493 568 IPR001199 -
Prci2g0476 865 Gene3D - 318 490 - -
Prci2g0476 865 SMART Cyt_b5_2 496 568 IPR001199 -
Prci2g0476 865 PRINTS Cytochrome B5 signature 528 542 IPR001199 -
Prci2g0476 865 PRINTS Cytochrome B5 signature 555 567 IPR001199 -
Prci2g0476 865 PRINTS Cytochrome B5 signature 518 528 IPR001199 -
Prci2g0476 865 PRINTS Cytochrome B5 signature 543 550 IPR001199 -
Prci2g0476 865 MobiDBLite consensus disorder prediction 30 49 - -
Prci2g0476 865 Pfam Mo-co oxidoreductase dimerisation domain 314 445 IPR005066 GO:0016491|GO:0030151
Prci2g0476 865 CDD eukary_NR_Moco 65 443 - -
Prci2g0476 865 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 739 758 IPR001709 GO:0016491
Prci2g0476 865 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 661 668 IPR001709 GO:0016491
Prci2g0476 865 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 765 774 IPR001709 GO:0016491
Prci2g0476 865 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 833 841 IPR001709 GO:0016491
Prci2g0476 865 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 809 825 IPR001709 GO:0016491
Prci2g0476 865 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 777 788 IPR001709 GO:0016491
Prci2g0476 865 SUPERFAMILY Riboflavin synthase domain-like 601 721 IPR017938 -
Prci2g0476 865 PIRSF Nitr_rd_NADH 5 864 IPR012137 GO:0006809|GO:0042128|GO:0050464
Prci2g0476 865 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 609 721 IPR017927 GO:0016491
Prci2g0476 865 Pfam Cytochrome b5-like Heme/Steroid binding domain 499 567 IPR001199 -
Prci2g0476 865 FunFam Nitrate reductase [NADH] 716 865 - -
Prci2g0476 865 FunFam NADH-cytochrome b5 reductase 599 715 - -
Prci2g0476 865 FunFam Sulfite oxidase, mitochondrial 492 571 - -
Prci2g0476 865 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 491 579 IPR036400 -
Prci2g0476 865 CDD cyt_b5_reduct_like 614 865 - -
Prci2g0476 865 Gene3D - 57 307 IPR036374 -
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 249 262 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 232 248 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 148 159 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 316 328 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 95 111 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 159 171 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 265 278 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 361 373 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 426 439 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 73 87 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 388 398 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 413 425 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 347 361 IPR008335 GO:0016491
Prci2g0476 865 PRINTS Eukaryotic molybdopterin domain signature 174 189 IPR008335 GO:0016491
Prci2g0476 865 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 62 314 IPR036374 -
Prci2g0476 865 PANTHER SULFITE REDUCTASE 36 447 - -
Prci2g0476 865 PRINTS Cytochrome B5 reductase signature 777 788 - -
Prci2g0476 865 PRINTS Cytochrome B5 reductase signature 833 841 - -
Prci2g0476 865 PRINTS Cytochrome B5 reductase signature 640 651 - -
Prci2g0476 865 PRINTS Cytochrome B5 reductase signature 661 668 - -
Prci2g0476 865 PRINTS Cytochrome B5 reductase signature 706 720 - -
Prci2g0476 865 PRINTS Cytochrome B5 reductase signature 739 758 - -
Prci2g0476 865 Gene3D - 491 568 IPR036400 -
Prci2g0476 865 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 708 860 IPR039261 -
Prci2g0476 865 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 124 159 IPR022407 GO:0043546
Prci2g0476 865 MobiDBLite consensus disorder prediction 15 49 - -
Prci2g0476 865 MobiDBLite consensus disorder prediction 15 29 - -
Prci2g0476 865 SUPERFAMILY E set domains 318 445 IPR014756 -
Prci2g0476 865 Pfam Oxidoreductase molybdopterin binding domain 107 286 IPR000572 -
Prci2g0476 865 Pfam Oxidoreductase FAD-binding domain 614 720 IPR008333 -
Prci2g0476 865 Pfam Oxidoreductase NAD-binding domain 740 847 IPR001433 GO:0016491
Prci2g0476 865 FunFam Nitrate reductase 318 492 - -
Prci2g0476 865 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 524 531 IPR018506 GO:0020037
Prci2g0476 865 Gene3D Translation factors 601 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0476 Prci-Chr2 3509580 3513193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0476 598 856 NADPH P450 reductases AT5G17770 38.314 8.33e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0476 K10534 - qsa:O6P43_015229 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0476 2 3509580 3513193 Prci2g0476 2 3509580 3513193 ECH