Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0469 ATGACTAATTGTAAAGACAAGGTTGCCAATGCCATTCATTCTTTGCCGGTGGAATCTCAAAATGTAGATGGTCAGAAGAAAGTCCAGTTCTCAGGAGGAAATGACACTACTGCCCAGGGGGCCGATGATGGAATGGCCACTGAGTTGGAGAACTTATCATCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGCTGCAAGCACCCAGCCAGAAGAATTTAATTTATTCAATCAAGATCCAAAGCACCAGAGTGTTTTGCAGGCAGAGTCTGAATTAAGTTTGAGATCTGATGGAGGATTAAACTCCCAGTTGGCAAAAAGAACAACAGCTCTTCAGGATCATCTGCAGCAATTCAGAAACTTTTTAAGCCGGCCAGCTACTCAATCTTCAGTAGTGGGACCTTCATGTGCTACAACAACATCTGTCCATTTGTCTTCAGCTCCTATGTTGAATTCAACAACCCATTATTCTCATTCACATGTAGGCGGTTCACATGTGGCAGCAGAACCTTTGAGGGAAAATAATGTTAATTCTCATCCGATGACTCAAGGAGTTGTGAAATCATCTAGCACTCACCTAAAAGAGACTGATAAAATGTCAGTGGATCAAGCAGCAGTTGCATCTAGTTCTGCCATTAATGCAGGGGTAGCATCTAAGGATGGTGACCTATGTAAGGAGCACCAAGGCAGCATGCTAAAGGAAAGTAACGCTTCTAAAATTGCTGGCGATGATAAGACATCTAAGGGGAACGAATCTGCAGATGTTACCAACATACAACCTCAGGCTCCAGTGTCGAGAACTTCATTTTCGGATGTTAAGTTGGACTCCTCTAAGTCAGAAAAACAAGAGAAGGCAGTTAGTAGTAAAGGCACAACAACTACCCGGAAAAGGGCCTATGACCCTGATTTGTTTTTCAAAGTAAACGGCAAGCTTTATCAAAGGCTTGGGAAGATAGGTAGTGGAGGAAGTAGTGAAGTACACAAAGTAATATCATCAGACTGTACAATCTATGCACTTAAAAAGATCAAGCTGAAGGGTCGTGATTATGCCACTGCATGTGGTTTCTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGTAAAAATAATATTATACAGCTGGTGGACTATGAGGTGACTGACAAGACATTGCTTGATGAAGTCCTGAGAGGCTCCTTGAGTAATAAAGACAGCCGAGTCAAGGATGATGGATACATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGCTGTCTCAGAAGTGGAAGGAACTGGATGGATACGACCAGACTATAGATGAGAATTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAATACAATACACGAGGAACGTATAGTGCATTCTGACCTCAAACCAGCTAACTTTCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGCATAGCCAAAGCAATAATGAGCGATACAACAAATATCCAACGAGATTCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAGGCATTTTTGTGCAATGAGAGTGATGCAAATGGAAATATCATAAAGTGTGGCCGTCCATCGGATATTTGGTCTCTGGGCTGCATTCTCTATCAAATGGTATATGGCAGGACGCCATTTTCGGAGTACAAGACGTTCTGGGCCAAATTCAAAGTTATAACAGATCCAAATCATGAAATTACGTATGAACCCGTTTCAAATCCATGGCTTCTAGATCTCATGAAGAGGTGTCTAGCATGGGACCGCAATGAAAGATGGAGAATTCCTCAGCTTCTCCAACATCCGTTTCTCGTTCCACCAACTCCGCCAAAGCCTTTCCGGTCCCAAGACCAAAGCTTTAAATTGCTGCAATTTATAGCTGAAGCTTGTATAGATGACCCAGATGCTTCAAGGCTCTGTTGTCAGCTCCAGCAAGTGGTTGAGGATCCACTTAAGTCAATAACTCCCCACTCTCTAAGCTCACGAGATCAACAATGTAAACTACTGTCCCAATTGTCAGAACTTTGCCTTCAGCTGCATGAGCGACTAAAGTTCGGATAA 2070 0.4246 MTNCKDKVANAIHSLPVESQNVDGQKKVQFSGGNDTTAQGADDGMATELENLSSHMGSLALTEMEWAASTQPEEFNLFNQDPKHQSVLQAESELSLRSDGGLNSQLAKRTTALQDHLQQFRNFLSRPATQSSVVGPSCATTTSVHLSSAPMLNSTTHYSHSHVGGSHVAAEPLRENNVNSHPMTQGVVKSSSTHLKETDKMSVDQAAVASSSAINAGVASKDGDLCKEHQGSMLKESNASKIAGDDKTSKGNESADVTNIQPQAPVSRTSFSDVKLDSSKSEKQEKAVSSKGTTTTRKRAYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATACGFCQEIEYLNRLKGKNNIIQLVDYEVTDKTLLDEVLRGSLSNKDSRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGYDQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFLCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPTPPKPFRSQDQSFKLLQFIAEACIDDPDASRLCCQLQQVVEDPLKSITPHSLSSRDQQCKLLSQLSELCLQLHERLKFG 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0469 689 MobiDBLite consensus disorder prediction 177 204 - -
Prci2g0469 689 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Prci2g0469 689 Gene3D Phosphorylase Kinase; domain 1 307 391 - -
Prci2g0469 689 Gene3D Transferase(Phosphotransferase) domain 1 430 610 - -
Prci2g0469 689 FunFam serine/threonine-protein kinase mph1 isoform X1 428 610 - -
Prci2g0469 689 FunFam serine/threonine-protein kinase mph1 isoform X2 307 394 - -
Prci2g0469 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Prci2g0469 689 MobiDBLite consensus disorder prediction 177 192 - -
Prci2g0469 689 MobiDBLite consensus disorder prediction 253 274 - -
Prci2g0469 689 CDD PKc_Mps1 312 607 IPR027084 -
Prci2g0469 689 Pfam Protein kinase domain 314 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0469 689 PANTHER MIXED LINEAGE PROTEIN KINASE 28 637 - -
Prci2g0469 689 MobiDBLite consensus disorder prediction 231 295 - -
Prci2g0469 689 SUPERFAMILY Protein kinase-like (PK-like) 308 618 IPR011009 -
Prci2g0469 689 SMART serkin_6 314 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0469 689 ProSiteProfiles Protein kinase domain profile. 314 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0469 Prci-Chr2 3396073 3400359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0469 320 608 MAP Kinase Kinase Kinase AT4G08470 28.669 2.07e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Prci2g0469 Pkinase 1.3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0469 K08866 - qsa:O6P43_015223 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0469 2 3396073 3400359 Prci2g0469 2 3396073 3400359 ECH