Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0468 ATGGATGGGAAGGCTAACCTTCCGGTCTCGCCTCCAACTGCGAAGAACCTGATCCGTCCAATCAATCCCGATACTACATCGTCTTCCTCATCGTCCCTCTCTTCTTCCTCCCCGCCGGACTTCCTCCGGCATGTTCAAGCCGCCTTCAAGCGTCATCGTCCTCTCGGTACAGTGCATTCAAATATAAGGCCACGGCGCATGATGGTTCCTCAACGTGAGGTGTCAAGAAATTCTACACTGAACGTTGGTTCAGATGTGGAGAATAAGAAGTCCCAGGAGTTATCGTTAAGTAAGGTTCAGTCAGAGGAGTCATGTGCACATAGAAATAGCTCAATTTCGATGATTAGAGAAGGTCAAGAGGACGCTTTAATCACACCTCCTGTTTCTGGCAGTTGCTACAATGCACCTGACAAAGGATGCAACTCATTCAATGCAAAAGAATGTCATTTAGGTGCAATGACTAATTGTAAAGACAAGGTTGCCAATGCCATTCATTCTTTGCCGGTGGAATCTCAAAATGTAGATGGTCAGAAGAAAGTCCAGTTCTCAGGAGGAAATGACACTACTGCCCAGGAAATGGAATGGGCTGCAAGCACCCAGCCAGAAGAATTTAATTTATTCAATCAAGATCCAAAGCACCAGAGTGTTTTGCAGGCAGAGTCTGAATTAAGTTTGAGATCTGATGGAGGATTAAACTCCCAGTTGGCAAAAAGAACAACAGCTCTTCAGGATCATCTGCAGCAATTCAGAAACTTTTTAAGCCGGCCAGCTACTCAATCTTCAGTAGTGGGACCTTCATGTGCTACAACAACATCTGTCCATTTGTCTTCAGCTCCTATGTTGAATTCAACAACCCATTATTCTCATTCACATGTAGGCGGTTCACATGTGGCAGCAGAACCTTTGAGGGAAAATAATGTTAATTCTCATCCGATGACTCAAGGAGTTGTGAAATCATCTAGCACTCACCTAAAAGAGACTGATAAAATGTCAGTGGATCAAGCAGCAGTTGCATCTAGTTCTGCCATTAATGCAGGGGTAGCATCTAAGGATGGTGACCTATGTAAGGAGCACCAAGGCAGCATGCTAAAGGAAAGTAACGCTTCTAAAATTGCTGGCGATGATAAGACATCTAAGGGGAACGAATCTGCAGATGTTACCAACATACAACCTCAGGCTCCAGTGTCGAGAACTTCATTTTCGGATGTTAAGTTGGACTCCTCTAAGTCAGAAAAACAAGAGAAGGCAGTTAGTAGTAAAGGCACAACAACTACCCGGAAAAGGGCCTATGACCCTGATTTGTTTTTCAAAGTAAACGGCAAGCTTTATCAAAGGCTTGGGAAGATAGGTAGTGGAGGAAGTAGTGAAGTACACAAAGTAATATCATCAGACTGTACAATCTATGCACTTAAAAAGATCAAGCTGAAGGGTCGTGATTATGCCACTGCATGTGGTTTCTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGTAAAAATAATATTATACAGCTGGTGGACTATGAGGTGACTGACAAGACATTGCTTGATGAAGTCCTGAGAGGCTCCTTGAGTAATAAAGACAGCCGAGTCAAGGATGATGGATACATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGCTGTCTCAGAAGTGGAAGGAACTGGATGGATACGACCAGACTATAGATGAGAATTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAATACAATACACGAGGAACGTATAGTGCATTCTGACCTCAAACCAGCTAACTTTCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGCATAGCCAAAGCAATAATGAGCGATACAACAAATATCCAACGAGATTCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAGGCATTTTTGTGCAATGAGAGTGATGCAAATGGAAATATCATAAAGTGTGGCCGTCCATCGGATATTTGGTCTCTGGGCTGCATTCTCTATCAAATGGTATATGGCAGGACGCCATTTTCGGAGTACAAGACGTTCTGGGCCAAATTCAAAGTTATAACAGATCCAAATCATGAAATTACGTATGAACCCGTTTCAAATCCATGGCTTCTAGATCTCATGAAGAGGTGTCTAGCATGGGACCGCAATGAAAGATGGAGAATTCCTCAGCTTCTCCAACATCCGTTTCTCGTTCCACCAACTCCGCCAAAGCCTTTCCGGTCCCAAGACCAAAGCTTTAAATTGCTGCAATTTATAGCTGAAGCTTGTATAGATGACCCAGATGCTTCAAGGCTCTGTTGTCAGCTCCAGCAAGTGGTTGAGGATCCACTTAAGTCAATAACTCCCCACTCTCTAAGCTCACGAGATCAACAATGTAAACTACTGTCCCAATTGTCAGAACTTTGCCTTCAGCTGCATGAGCGACTAAAGTTCGGATAA 2457 0.433 MDGKANLPVSPPTAKNLIRPINPDTTSSSSSSLSSSSPPDFLRHVQAAFKRHRPLGTVHSNIRPRRMMVPQREVSRNSTLNVGSDVENKKSQELSLSKVQSEESCAHRNSSISMIREGQEDALITPPVSGSCYNAPDKGCNSFNAKECHLGAMTNCKDKVANAIHSLPVESQNVDGQKKVQFSGGNDTTAQEMEWAASTQPEEFNLFNQDPKHQSVLQAESELSLRSDGGLNSQLAKRTTALQDHLQQFRNFLSRPATQSSVVGPSCATTTSVHLSSAPMLNSTTHYSHSHVGGSHVAAEPLRENNVNSHPMTQGVVKSSSTHLKETDKMSVDQAAVASSSAINAGVASKDGDLCKEHQGSMLKESNASKIAGDDKTSKGNESADVTNIQPQAPVSRTSFSDVKLDSSKSEKQEKAVSSKGTTTTRKRAYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATACGFCQEIEYLNRLKGKNNIIQLVDYEVTDKTLLDEVLRGSLSNKDSRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGYDQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFLCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPTPPKPFRSQDQSFKLLQFIAEACIDDPDASRLCCQLQQVVEDPLKSITPHSLSSRDQQCKLLSQLSELCLQLHERLKFG 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0468 818 MobiDBLite consensus disorder prediction 19 39 - -
Prci2g0468 818 MobiDBLite consensus disorder prediction 360 424 - -
Prci2g0468 818 Pfam Protein kinase domain 443 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0468 818 Gene3D Phosphorylase Kinase; domain 1 436 520 - -
Prci2g0468 818 MobiDBLite consensus disorder prediction 72 109 - -
Prci2g0468 818 ProSitePatterns Protein kinases ATP-binding region signature. 449 471 IPR017441 GO:0005524
Prci2g0468 818 Gene3D Transferase(Phosphotransferase) domain 1 559 739 - -
Prci2g0468 818 CDD PKc_Mps1 441 736 IPR027084 -
Prci2g0468 818 MobiDBLite consensus disorder prediction 71 109 - -
Prci2g0468 818 ProSiteProfiles Protein kinase domain profile. 443 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0468 818 MobiDBLite consensus disorder prediction 1 39 - -
Prci2g0468 818 MobiDBLite consensus disorder prediction 306 321 - -
Prci2g0468 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Prci2g0468 818 MobiDBLite consensus disorder prediction 306 333 - -
Prci2g0468 818 FunFam serine/threonine-protein kinase mph1 isoform X2 436 523 - -
Prci2g0468 818 SMART serkin_6 443 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0468 818 PANTHER MIXED LINEAGE PROTEIN KINASE 26 766 - -
Prci2g0468 818 SUPERFAMILY Protein kinase-like (PK-like) 437 747 IPR011009 -
Prci2g0468 818 FunFam serine/threonine-protein kinase mph1 isoform X1 557 739 - -
Prci2g0468 818 MobiDBLite consensus disorder prediction 382 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0468 Prci-Chr2 3394977 3400359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0468 449 737 MAP Kinase Kinase Kinase AT4G08470 28.669 2.58e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Prci2g0468 Pkinase 1.9e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0468 K08866 - qsa:O6P43_015223 1100.5