Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0467 ATGGATGGGAAGGCTAACCTTCCGGTCTCGCCTCCAACTGCGAAGAACCTGATCCGTCCAATCAATCCCGATACTACATCGTCTTCCTCATCGTCCCTCTCTTCTTCCTCCCCGCCGGACTTCCTCCGGCATGTTCAAGCCGCCTTCAAGCGTCATCGTCCTCTCGGTACAGTGCATTCAAATATAAGGCCACGGCGCATGATGGTTCCTCAACGTGAGGTGTCAAGAAATTCTACACTGAACGTTGGTTCAGATGTGGAGAATAAGAAGTCCCAGGAGTTATCGTTAAGTAAGGTTCAGTCAGAGGAGTCATGTGCACATAGAAATAGCTCAATTTCGATGATTAGAGAAGGTCAAGAGGACGCTTTAATCACACCTCCTGTTTCTGGCAGTTGCTACAATGCACCTGACAAAGGATGCAACTCATTCAATGCAAAAGAATGTCATTTAGGTGCAATGACTAATTGTAAAGACAAGGTTGCCAATGCCATTCATTCTTTGCCGGTGGAATCTCAAAATGTAGATGGTCAGAAGAAAGTCCAGTTCTCAGGAGGAAATGACACTACTGCCCAGGGGGCCGATGATGGAATGGCCACTGAGTTGGAGAACTTATCATCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGCTGCAAGCACCCAGCCAGAAGAATTTAATTTATTCAATCAAGATCCAAAGCACCAGAGTGTTTTGCAGGCAGAGTCTGAATTAAGTTTGAGATCTGATGGAGGATTAAACTCCCAGTTGGCAAAAAGAACAACAGCTCTTCAGGATCATCTGCAGCAATTCAGAAACTTTTTAAGCCGGCCAGCTACTCAATCTTCAGTAGTGGGACCTTCATGTGCTACAACAACATCTGTCCATTTGTCTTCAGCTCCTATGTTGAATTCAACAACCCATTATTCTCATTCACATGTAGGCGGTTCACATGTGGCAGCAGAACCTTTGAGGGAAAATAATGTTAATTCTCATCCGATGACTCAAGGAGTTGTGAAATCATCTAGCACTCACCTAAAAGAGACTGATAAAATGTCAGTGGATCAAGCAGCAGTTGCATCTAGTTCTGCCATTAATGCAGGGGTAGCATCTAAGGATGGTGACCTATGTAAGGAGCACCAAGGCAGCATGCTAAAGGAAAGTAACGCTTCTAAAATTGCTGGCGATGATAAGACATCTAAGGGGAACGAATCTGCAGATGTTACCAACATACAACCTCAGGCTCCAGTGTCGAGAACTTCATTTTCGGATGTTAAGTTGGACTCCTCTAAGTCAGAAAAACAAGAGAAGGCAGTTAGTAGTAAAGGCACAACAACTACCCGGAAAAGGGCCTATGACCCTGATTTGTTTTTCAAAGTAAACGGCAAGCTTTATCAAAGGCTTGGGAAGATAGGTAGTGGAGGAAGTAGTGAAGTACACAAAGTAATATCATCAGACTGTACAATCTATGCACTTAAAAAGATCAAGCTGAAGGGTCGTGATTATGCCACTGCATGTGGTTTCTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGTAAAAATAATATTATACAGCTGGTGGACTATGAGGTGACTGACAAGACATTGCTTGATGAAGTCCTGAGAGGCTCCTTGAGTAATAAAGACAGCCGAGTCAAGGATGATGGATACATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGCTGTCTCAGAAGTGGAAGGAACTGGATGGATACGACCAGACTATAGATGAGAATTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAATACAATACACGAGGAACGTATAGTGCATTCTGACCTCAAACCAGCTAACTTTCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGCATAGCCAAAGCAATAATGAGCGATACAACAAATATCCAACGAGATTCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAGGCATTTTTGTGCAATGAGAGTGATGCAAATGGAAATATCATAAAGTGTGGCCGTCCATCGGATATTTGGTCTCTGGGCTGCATTCTCTATCAAATGGTATATGGCAGGACGCCATTTTCGGAGTACAAGACGTTCTGGGCCAAATTCAAAGTTATAACAGATCCAAATCATGAAATTACGTATGAACCCGTTTCAAATCCATGGCTTCTAGATCTCATGAAGAGGTGTCTAGCATGGGACCGCAATGAAAGATGGAGAATTCCTCAGCTTCTCCAACATCCGTTTCTCGTTCCACCAACTCCGCCAAAGCCTTTCCGGTCCCAAGACCAAAGCTTTAAATTGCTGCAATTTATAGCTGAAGCTTGTATAGATGACCCAGATGCTTCAAGGCTCTGTTGTCAGCTCCAGCAAGTGGTTGAGGATCCACTTAAGTCAATAACTCCCCACTCTCTAAGCTCACGAGATCAACAATGTAAACTACTGTCCCAATTGTCAGAACTTTGCCTTCAGCTGCATGAGCGACTAAAGTTCGGATAA 2526 0.4343 MDGKANLPVSPPTAKNLIRPINPDTTSSSSSSLSSSSPPDFLRHVQAAFKRHRPLGTVHSNIRPRRMMVPQREVSRNSTLNVGSDVENKKSQELSLSKVQSEESCAHRNSSISMIREGQEDALITPPVSGSCYNAPDKGCNSFNAKECHLGAMTNCKDKVANAIHSLPVESQNVDGQKKVQFSGGNDTTAQGADDGMATELENLSSHMGSLALTEMEWAASTQPEEFNLFNQDPKHQSVLQAESELSLRSDGGLNSQLAKRTTALQDHLQQFRNFLSRPATQSSVVGPSCATTTSVHLSSAPMLNSTTHYSHSHVGGSHVAAEPLRENNVNSHPMTQGVVKSSSTHLKETDKMSVDQAAVASSSAINAGVASKDGDLCKEHQGSMLKESNASKIAGDDKTSKGNESADVTNIQPQAPVSRTSFSDVKLDSSKSEKQEKAVSSKGTTTTRKRAYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATACGFCQEIEYLNRLKGKNNIIQLVDYEVTDKTLLDEVLRGSLSNKDSRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGYDQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFLCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPTPPKPFRSQDQSFKLLQFIAEACIDDPDASRLCCQLQQVVEDPLKSITPHSLSSRDQQCKLLSQLSELCLQLHERLKFG 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0467 841 MobiDBLite consensus disorder prediction 19 39 - -
Prci2g0467 841 CDD PKc_Mps1 464 759 IPR027084 -
Prci2g0467 841 Pfam Protein kinase domain 466 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0467 841 FunFam serine/threonine-protein kinase mph1 isoform X1 580 762 - -
Prci2g0467 841 MobiDBLite consensus disorder prediction 405 426 - -
Prci2g0467 841 Gene3D Phosphorylase Kinase; domain 1 459 543 - -
Prci2g0467 841 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Prci2g0467 841 SUPERFAMILY Protein kinase-like (PK-like) 460 770 IPR011009 -
Prci2g0467 841 MobiDBLite consensus disorder prediction 72 109 - -
Prci2g0467 841 MobiDBLite consensus disorder prediction 383 447 - -
Prci2g0467 841 MobiDBLite consensus disorder prediction 71 109 - -
Prci2g0467 841 MobiDBLite consensus disorder prediction 329 356 - -
Prci2g0467 841 MobiDBLite consensus disorder prediction 1 39 - -
Prci2g0467 841 FunFam serine/threonine-protein kinase mph1 isoform X2 459 546 - -
Prci2g0467 841 SMART serkin_6 466 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0467 841 MobiDBLite consensus disorder prediction 329 344 - -
Prci2g0467 841 ProSiteProfiles Protein kinase domain profile. 466 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0467 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Prci2g0467 841 Gene3D Transferase(Phosphotransferase) domain 1 582 762 - -
Prci2g0467 841 PANTHER MIXED LINEAGE PROTEIN KINASE 26 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0467 Prci-Chr2 3394976 3400359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0467 472 760 MAP Kinase Kinase Kinase AT4G08470 28.669 3.18e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Prci2g0467 Pkinase 2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0467 K08866 - qsa:O6P43_015223 1147.5