Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0466 ATGAGCAAATCTAGGGTCCACAAGAAACTCACCAAGCAAGCCATTGCCGATCAGAACCAAAAGCCGCAGAAATCAGAGAAACAACCGTCTTGGGTGGTGGTGAGAGGCCTATTGACCTGTAGAAACGTTCAAACCCAGCAGCAGCAGAAGCAGTCGCAACAGATTCCTGAAGGGAAACAACAGCCGAAGAAGAAACAAGAACAGCGAAAGTTGCAAGAAGAAAGAGTCCCAGAAGATCAGAACGGCAAGAAGTGCAAGAAGATGAAATGTTCAGGCTCGCTTTGTAATAACACCAATATCATGGCTAGGCCTGAAACGGGATGCCCTGATGCCCACAACAAAAAGGCCTCACTGTCTGCATGTAGCGGCAGCAACAATGATGCTTCAAGCAGATCCATGAAAGCTCCTCCTCGAGAACCAAACACCGCTGTTTTAGCATCTTCTTCTTCATTGTCAGCATCTTCTAGTTCTTCTGTTAGCGGGTCTTTCAAGGGAATGCCCTTCAGGAGACTCTCTGGTTGTTACGAGTGCCGAATGGTGGTTGACCCTGTTCTGGGTTTCACCAGAGACCCTTCTCTCCGGAGTAGCATTTGCTCATGCCCAGATTGTGGTGAGATCTTCATGAAAGCTGAAAGCTTGGAGCTTCATCAGGCTGTTAAACATGCAGTGTCGGAACTGGGTCCCGAAGATACAAGCAAGAATATAGTAGAAATCATATTCCATTCAAGCTGGCTAAAGAAACAGTCCCCAGTCTGCAAAATAGATCGCATCCTTAAAGTCCACAACAACCAGAAGACGATTTCCAGATTTGAAGAATATAGAGACACCATAAAAGCCAAAGCCACAAAGCTCCCCAAGAAACACCCACGTTGCATAGCAGATGGCAACGAGCTGCTCAGGTTTCACGCAACCACCTTCGTCTGCTCTCTGGGCCTAAACGGTTCGTCTAACCTCTGTAACTCAATGCCTCAGTGCAACGTTTGCAACATAATAAAGAACGGATTCAAGGTCGCCGTAGAAACGAACGGAGGAAACGACGGGACGGGAATATTGACGACGGCGACTAGCGGGAAGGCACACGACAAAGCTGTGGTTTCCGCGGACGAGAACAACGACATTAGGGCGATGCTGGTTTGTCGGGTAATAGCTGGCAGGGTGAAGAAGAATGTGGAAGGAAGCATGGAGGAGTATGATTCCATGGGAGGGGGTGTCGGGGCGTACTCTAACTTGGACGAGTTGTATGTGTTCAATCCAAGAGCTATATTGCCTTGTTTTGTTGTGATCTACAGAGGATTTTGA 1299 0.4788 MSKSRVHKKLTKQAIADQNQKPQKSEKQPSWVVVRGLLTCRNVQTQQQQKQSQQIPEGKQQPKKKQEQRKLQEERVPEDQNGKKCKKMKCSGSLCNNTNIMARPETGCPDAHNKKASLSACSGSNNDASSRSMKAPPREPNTAVLASSSSLSASSSSSVSGSFKGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIFMKAESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNNQKTISRFEEYRDTIKAKATKLPKKHPRCIADGNELLRFHATTFVCSLGLNGSSNLCNSMPQCNVCNIIKNGFKVAVETNGGNDGTGILTTATSGKAHDKAVVSADENNDIRAMLVCRVIAGRVKKNVEGSMEEYDSMGGGVGAYSNLDELYVFNPRAILPCFVVIYRGF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0466 432 MobiDBLite consensus disorder prediction 43 85 - -
Prci2g0466 432 FunFam C2H2-like zinc finger protein 222 430 - -
Prci2g0466 432 ProSiteProfiles Zinc finger C2H2 type domain profile. 198 226 IPR013087 -
Prci2g0466 432 MobiDBLite consensus disorder prediction 13 27 - -
Prci2g0466 432 Gene3D - 222 430 - -
Prci2g0466 432 MobiDBLite consensus disorder prediction 43 59 - -
Prci2g0466 432 MobiDBLite consensus disorder prediction 119 158 - -
Prci2g0466 432 ProSitePatterns Zinc finger C2H2 type domain signature. 198 221 IPR013087 -
Prci2g0466 432 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 83 429 - -
Prci2g0466 432 MobiDBLite consensus disorder prediction 1 30 - -
Prci2g0466 432 SUPERFAMILY ADP-ribosylation 223 431 - -
Prci2g0466 432 MobiDBLite consensus disorder prediction 60 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0466 Prci-Chr2 3386966 3388721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0466 163 430 C2H2 Transcription Factor Family AT1G75710 53.925 2.26e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci2g0466 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0466 - - qsa:O6P43_015222 613.224