Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0461 ATGGAACCCATTTCTTCCTATTCTTTGTTCTGCATTTCCTCAAACTTCGTGATGGAATCTGTCTTTTACTTCTCTCTCACTTCTCTCTTGTTTTCTTCCATCTCTGCCTACACGTTCTCGGAATCTATCAATCCAAATTTCACTGCTTCATATCTTCAGTTCATTGACCGCTCTGGCACCTTCTTGACATCCCGCAATGGAACATTCGAGGCTGCTATATTCAATCCTGGCGATCAACAATCCAGATTCTACTTTTGTGTCTTCCATGTGGCATCCCACACCATCATCTGGTCGGCTAATCGTGAAGCTCCCATCTCAAATTCTGATACGATGAACCTAACTACGAAAGGGATCACTATTTTTGATCACGATGGAAGCCTCAAATGGTCAACCCCACCATTGAAATCAGCAGTATCAGCATTACAACTAACTGAAACGGGCAATCTCGTCTTACTCGATCATTCCAATGGTTCTCTCTGGGAAAGCTTCCAGCATCCAACAGACACAATTGTTATTGGACAGCGCTTACCTGTTCGAACATGGCTGTCAAGTGCGATATCAGGGTCTGACTTGTCAACTGGGGATTACAACTTAAGTATCACTCCGTCTGACGCAATACTTCAGTGGCATGGCCAGACATACTGGAGGTTGTCGATGGCCAAAAATGCCTTCAAGGATTCAAATTATATGGTCGAATACATGGCTATAAACAGAACAGCTCTCGATCTTTTTGGAAGTAATGGAACAGTGACTGTGTTTAGGGTGGTCTTGCCGATGGCTGATTTCCGAATTGCCAAGTTGGCCGTTAATGGCCAGTTTACCGTCCAAAGCTTTTCCGGAACTAACTGGGTCCAGGAATTTGTGGGGCCGGATGATGGTTGTGACACTCCCTTTATTTGTGGCAGATTGGGATTATGCACTCATGGCACTGCGTCCTCGGCACCTACTTGTTCTTGTCCCTCAAACTTCAATGCAGGCTCAAGTAATGTTCGTGGTTGTGTGCCTAGCAATGCTTCTTATTCCTTGCCATTTGCGTGCAAATCATCTGGTTATGATAGTACATCAAATTCTTCAGCTGTTTCATATTTGAAACTCGGGAATGGTATGGAGTACTTTAGCAATACCTACTCTAACACCGTGACATATGTAGAGAACTCAACTATTTGCCAAGATCTGTGTTCTTGGAATTGTTCGTGCTTGGGATTTTTCTATGAAAATACGACTGGATCCTGCTCTATGCTTGAAAATGAGCTGGGGTCTATTTTGTCAGGTAGTGGAGGTACAAGTAACTCGTCGGGCTACATAAAAGTTGTTGTTGAATCTGCTACTGATATTGACGATCCTACTTCTGAAGAAGAGGGGCTTCCTGTGGCTGTTCTGGTGCTAATACCTCTTACTGGATTCATTATTGCTTTGGCTCTCGGTTTCCTCTGGCTCAGAAGATATAGAATCTCCAAGGGAGAAGAGATAAAATTAGGCAAGTTCAAATCGCATTCTTCAGAGGACCTGGAGGCATTCCATATTCCAGGCTTACCTAAAAGGTTTGATTATGAAGAACTTGTGGAGGCTACTGATGGTTTTAAGACTCTGATCGGTTCAGGTGGGTTTGGTGCGGTGTTCAAGGGACAACTACCTGATAAGACCGTTGTGGCGGTAAAGAAAATAGTAAATTTGGGAAATCAGGGGAAAAAGGATTTCTGCACTGAGATTGCAATTATTGGAAATATTCATCACGTTAATTTGGTGAAACTGAAAGGCTTTTGTGCTGAAGGAAGACAACGTCTGTTGATTTATGAGTACATGAATCGTGGCTCCCTGGATCGCACGCTCTTTGGTGGCGGACCAGTCTTGGAATGGCAGGAGAGGGTTGATATAGCACTGGGAACAGCGCGAGGGCTGGCCTATCTACACGGCGGGTGTGAGCAAAAGATCATTCACTGTGATATCAAACCTGAGAACATTCTTTTGCACGATCACTTCCAGGCAAAGATATCGGATTTTGGACTCTCAAAACTCCTCAGCCCCGAACAGTCTGGTTTATTCACAACCATGAGAGGCACAAGAGGCTATCTAGCTCCGGAGTGGCTTACGAACTCGGCAATCACAGAGAAAACTGATGTTTATAGTTTTGGAATGGTATTGCTTGAACTAGTGAGTGGAAGAAAAAATTGTTCTGTGGGGTCACAAAGCCCAAGCAAGGACGAGAGCAGCAGCTGCCGTTCAGGGACGTCATCGGTGACAGGACTGGTTTATTTTCCACTATTTGCGTTGGAGATGCATGAGCAAGGCAGGTACCTTGAGTTGGCTGACCCAAGGCTGGAAGGGCGGGTTTCAAATGACGAGGTGGAGAAACTAGTGCGTATAGCCTTGTGCTGTGTTCACGAAGAACCGGCGCTGAGGCCAAACATGGCTGCTGTTGTTGGCATGCTGGAAGGCGGGACTCCAATGGCCCAGCCAAGGATTGAATCTTTGAATTTCTTGCGCTTTTATGGGCGTACTTTTACAGAGGCTTCCATGCTAGCTGAGGAAAAACCCGCGTATCAACAAGCACAGAAACATTCAGCTACCACTAGCGGTTCTCAAACTGCGTTTTCTTACGTTTCTTCACATGATATCTCAGGGCCTAGATAA 2631 0.4512 MEPISSYSLFCISSNFVMESVFYFSLTSLLFSSISAYTFSESINPNFTASYLQFIDRSGTFLTSRNGTFEAAIFNPGDQQSRFYFCVFHVASHTIIWSANREAPISNSDTMNLTTKGITIFDHDGSLKWSTPPLKSAVSALQLTETGNLVLLDHSNGSLWESFQHPTDTIVIGQRLPVRTWLSSAISGSDLSTGDYNLSITPSDAILQWHGQTYWRLSMAKNAFKDSNYMVEYMAINRTALDLFGSNGTVTVFRVVLPMADFRIAKLAVNGQFTVQSFSGTNWVQEFVGPDDGCDTPFICGRLGLCTHGTASSAPTCSCPSNFNAGSSNVRGCVPSNASYSLPFACKSSGYDSTSNSSAVSYLKLGNGMEYFSNTYSNTVTYVENSTICQDLCSWNCSCLGFFYENTTGSCSMLENELGSILSGSGGTSNSSGYIKVVVESATDIDDPTSEEEGLPVAVLVLIPLTGFIIALALGFLWLRRYRISKGEEIKLGKFKSHSSEDLEAFHIPGLPKRFDYEELVEATDGFKTLIGSGGFGAVFKGQLPDKTVVAVKKIVNLGNQGKKDFCTEIAIIGNIHHVNLVKLKGFCAEGRQRLLIYEYMNRGSLDRTLFGGGPVLEWQERVDIALGTARGLAYLHGGCEQKIIHCDIKPENILLHDHFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCSVGSQSPSKDESSSCRSGTSSVTGLVYFPLFALEMHEQGRYLELADPRLEGRVSNDEVEKLVRIALCCVHEEPALRPNMAAVVGMLEGGTPMAQPRIESLNFLRFYGRTFTEASMLAEEKPAYQQAQKHSATTSGSQTAFSYVSSHDISGPR 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0461 876 ProSiteProfiles PAN/Apple domain profile. 346 438 IPR003609 -
Prci2g0461 876 CDD B_lectin 55 166 IPR001480 -
Prci2g0461 876 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 59 164 - -
Prci2g0461 876 SUPERFAMILY Protein kinase-like (PK-like) 503 810 IPR011009 -
Prci2g0461 876 PIRSF SRK 14 862 IPR024171 GO:0004674
Prci2g0461 876 MobiDBLite consensus disorder prediction 849 869 - -
Prci2g0461 876 Pfam S-locus glycoprotein domain 246 324 IPR000858 GO:0048544
Prci2g0461 876 SMART ntp_6 357 434 IPR003609 -
Prci2g0461 876 MobiDBLite consensus disorder prediction 849 876 - -
Prci2g0461 876 Gene3D Phosphorylase Kinase; domain 1 496 600 - -
Prci2g0461 876 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 217 IPR036426 -
Prci2g0461 876 Pfam D-mannose binding lectin 94 178 IPR001480 -
Prci2g0461 876 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Prci2g0461 876 Gene3D Transferase(Phosphotransferase) domain 1 601 821 - -
Prci2g0461 876 Pfam Protein kinase domain 529 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0461 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Prci2g0461 876 ProSiteProfiles Bulb-type lectin domain profile. 46 164 IPR001480 -
Prci2g0461 876 Gene3D - 53 165 IPR036426 -
Prci2g0461 876 ProSiteProfiles Protein kinase domain profile. 525 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0461 876 CDD STKc_IRAK 531 812 - -
Prci2g0461 876 FunFam Serine/threonine-protein kinase 601 818 - -
Prci2g0461 876 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 52 819 - -
Prci2g0461 876 SMART serkin_6 525 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0461 876 FunFam serine/threonine-protein kinase PBS1-like 494 600 - -
Prci2g0461 876 SMART blect_4 53 166 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0461 Prci-Chr2 3352399 3355209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0461 465 819 Receptor kinase-like Gene Family AT5G20050 39.037 2.63e-77 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci2g0461 Pkinase 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0461 - - qsa:O6P43_015213 1171.76