Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0456 ATGGCCATGCCGATGCCTATTGACATGTATGCCATCCCTGAGCTCGACTTTTCCGACTACACCGCCACTACTTCTTCCGACGACGACCATTGTAATTACTGGAACCACTGGTCCCCTGTCGTCAACTGGGACGCCTTCACATGTGGGCCCGGACACGACGGCTTCCATGACCTGATGGAAACCATGATGGACGACGCAGCCGCGGTAATGAGCCCCGGAACGGATCACGGAGTGGAAGAGGGAGGGTGCAGCAACTCCGCTTCTACGACGGAGCTAACCGTGGCTGACGAGGAATTGAACGGTTTGGAGGATTTCAAGGGTCTGAGACTGGTGCACCTCCTGATGGCGGCTGCCGAGGCTCTCACCGGTGTCAACAACAGCCGCGATCTGGCTATGGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCGCCCACCCACGGAACCAACATGGAGAGGCTAGCAGCGTACTTTACGGACGCCTTGAGGGGCTTAGTAGAAGGATCGCACGGCACCAAGCATTTGAATTGGACTGCCAACAGCGGCGACGAGAATCGTCATCAGACCGACATGCTGGCCGCCTTCCAGCTCCTTCAGGACATGTCACCGCACGTCAAATTCGCCCACTTCACTGCCAATCAGGCCATCCTGGAGGCGGTGGCCCAGGACAGGCGGGTCCACATCGTCGACTACGACATCATGGAGGGGACGCAATGGGCCTCCCTGATGCAGGCGCTGGCCTCCCGCAAGGACGGTCCACACATCAGGATCACTGCTATCTCCAGGACGGGAAGTGCTAGGAGATCAATCGCTACCGTCCAAGAGACGGGTCGTCGTTTGACCGCCTTCGCCGCTTCCATCGGCCAACCATTCTCGTTTCACCAATGCAGGCTCGACTCCGACGAAACGTTCCGACCCTCCGCCGTGAAATTGGTGCGGGGGGAGGCGGTGGTCTTCAACTGCATGCTCCACCTGCCCCACCAGAGCTACCGGGCACCCGAATCCGTGGAGTCGTTTCTGAGGGGGGCGGCGGCGCTGAAGACGAGAGTGGTGACGGTAGTGGAAGAGGAGGGAGGGCCGACGGGGAAAGAAGTGGGGTTCGTGGGGAGGTTCATGGACAGGCTGCATCATTATTCGGCGGTGTACGATTCGCTGGAGGCGGGGTTTCCGATGCAGGGTCGGGCGAGGGCGTTGGTGGAGCGGGTGTTCTTGGGGCCCCGAATAGCGGCGTCGCTGGCCCGGATATACAGAATGGGAGTGGTACAGGAGAGAGAAAGGGGGTCGTGGGGAGAGTGGTTGGGTGAGGAGGGGTTCAGGGGAGTGGACATAAGCTTCGCGAATCACTGTCAGGCGAAGCTATTGCTGGGTTTATTCAACGACGGGTACGGAGTGGAGGAGATGGGCAGTAAAAACAAGTTGGTATTGAGTTGGAAATCCCGGCGATTGCTTTCCGCTTCTGTTTGGTGTCCGTTTGTAAATTAA 1479 0.5855 MAMPMPIDMYAIPELDFSDYTATTSSDDDHCNYWNHWSPVVNWDAFTCGPGHDGFHDLMETMMDDAAAVMSPGTDHGVEEGGCSNSASTTELTVADEELNGLEDFKGLRLVHLLMAAAEALTGVNNSRDLAMVILVRLKELVSPTHGTNMERLAAYFTDALRGLVEGSHGTKHLNWTANSGDENRHQTDMLAAFQLLQDMSPHVKFAHFTANQAILEAVAQDRRVHIVDYDIMEGTQWASLMQALASRKDGPHIRITAISRTGSARRSIATVQETGRRLTAFAASIGQPFSFHQCRLDSDETFRPSAVKLVRGEAVVFNCMLHLPHQSYRAPESVESFLRGAAALKTRVVTVVEEEGGPTGKEVGFVGRFMDRLHHYSAVYDSLEAGFPMQGRARALVERVFLGPRIAASLARIYRMGVVQERERGSWGEWLGEEGFRGVDISFANHCQAKLLLGLFNDGYGVEEMGSKNKLVLSWKSRRLLSASVWCPFVN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0456 492 ProSiteProfiles GRAS family profile. 101 488 IPR005202 -
Prci2g0456 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 88 484 IPR005202 -
Prci2g0456 492 Pfam GRAS domain family 110 487 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0456 Prci-Chr2 3314335 3316026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0456 103 489 GRAS Transcription Factor Family AT3G54220 36.272 2.03e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci2g0456 GRAS 1.1e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0456 - - vvi:100250491 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0456 2 3314335 3316026 Prci2g0456 2 3314335 3316026 ECH