Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0447 ATGGTGAAGAGAGAACACAAGATCCAGGAGAGGGCATCGAAGGGGAAAGTATGCGTACCAGATGGGAAGAAGAAGTACAAGGGAGTGAGAATGAGGAGCTGGGGATCGTGGGTATCAGAGATTAGGGCACCTAACCAGAAAACAAGAATATGGCTGGGCTCTTACTCAACTCCTGAGGCAGCAGCCAGAGCCTATGACGCTGCACTTTTGTGCCTGAAAGGCTCCTCTGCAAATCTCAATTTCCCTTCTTCTTCTTCGCCCTTCAATATCCCTCAAGATACTCTTCTGTCCCCTAAATCAATCCAAAGAGTAGCTGCAGCAGCTGCTAATAGTTCCGTTGATAATGTCACCACCCTGCCTCCTCCTCCTCCTGCTTCAGCCTCTTCCTCATCAGTATCATCTTCATCAATGGTTTCCTCTCCCTCTAATCTAGTTGATGATGACGCTTCATTAATCTCATCCTTTAAGTCCTTCTCTAGGTATGATCACCCGAATGAACCAGTGCCTGCGACGGAACCTTGGTACGGCCTTGAAGGGCTGCAATCCCCTAAATATGTTGATCAAATGCTGAGTAGTGCTTCTTTTGATTTTTATTCACACCAGCTGCTCGATGATTTCTACGAAGAAATCGACATCAATTTGTGGAGCTTCTGCTGA 657 0.4673 MVKREHKIQERASKGKVCVPDGKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSSSSPFNIPQDTLLSPKSIQRVAAAAANSSVDNVTTLPPPPPASASSSSVSSSSMVSSPSNLVDDDASLISSFKSFSRYDHPNEPVPATEPWYGLEGLQSPKYVDQMLSSASFDFYSHQLLDDFYEEIDINLWSFC 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0447 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 148 - -
Prci2g0447 218 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Prci2g0447 218 Gene3D AP2/ERF domain 24 83 IPR036955 GO:0003700|GO:0006355
Prci2g0447 218 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Prci2g0447 218 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Prci2g0447 218 MobiDBLite consensus disorder prediction 112 133 - -
Prci2g0447 218 CDD AP2 24 84 IPR001471 GO:0003700|GO:0006355
Prci2g0447 218 FunFam ethylene-responsive transcription factor ERF014-like 24 84 - -
Prci2g0447 218 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Prci2g0447 218 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Prci2g0447 218 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0447 Prci-Chr2 3242884 3243802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0447 1 217 AP2-EREBP Transcription Factor Family AT1G21910 44.177 3.99e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci2g0447 AP2 2.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0447 - - gmx:100813615 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0447 2 3242884 3243802 Prci2g0447 2 3242884 3243802 ECH