Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0429 ATGGCGCATCTAACAACCGATTCCCCCCTTTCTCGTAGCATAGTTCGTGCTTTCTTGGACTTCCTTAACTTAGTTGAACCGGCCCCTGGCGTTGATGTAGAAGGGCTTGAGGTTGCCAGGGAGTGTTTGACAGAGGTGTTTAAGCTTAACACATCCCCGACAGATGTTCACACAAAATCTGTTTCTTTGATCGACATATTCAAGTCCCTTGAATCAAACAAGCAATGTGAAGCTGGTCAGTCAGATGATGGTAAACAACCAGATGACATGGATGCTTCGGGGTCATTCAGTGCCCACAATGCTGATCATACACAAAAACATTCCGAGGATGGAGATTGGACTCGCTGGTCTCGCACATTTGGAGTTTCCAAAGATGAACTGTGTGGGCAATTCTTTAATGCTCTGGAGAAAGTCCACTTCTTTAGGACAAATCCTGATGGTACTGATGACCCAGTGCAATTGGAGAAAGCATCTCGTATATTCAATGATGCTGTAATGGAGATGGAAAGTTCTGAGTGTCAGGAGTTTAGTCTAAAGAACTTGGCTGAATTGCTGAAATCACAAGGTAATAAGGCAATGCAATCCAAGCAATACCTTGATGCAATTGATTTGTATAATTGTGCAATTGCACTTTGTGGAGAGAATGCTGTTTACTACTGCAACAGGGCAGCTGCTTACACTCAGATCCACAAATATACAGAAGCAATCCAAGACTGTCTTAAATCTACCGAGATTGACCCAAACTATAGCAAAGCGTATAGTCGACTGGGTTTAGCATATTATGCTCAAGGAAATTACAGAGATGCCATTGATAAAGGGTTTAGGAAAGCCTTGCTATTGGATCCAAGTAATGAGTCGATTAAAGAAAATATACAGGTTGCTGAGCACAAATTGATAGAAGAGCAACATCGTGCAGATCACAGTCAGAATTCAAGATCATCTCAGGAGTCTCAGAACCAGTCGACACGAGGGTCAAGAAGTAATGCGGCTCCTCCACTGTTTAACTCGATGCCATTTAATGCTAATGATCTTGCAAGCATGTTTATGAACATAGCCGCAAACACTGCCAGTGCGTATCAAGGACAGCATCCCGAGGAACAGCAAGGAGAAGATAGCAATACCAATTCAAGTAATGAACCTGAAATAAGAATCGGGAGCAATATTAATTTGAACTTGAACCAAATGCCCGAGGAAATGACGGGGACTTTGAGAACTGTGATGGAAATGTTATCTGGGGCAGCGCCTCCAGGCCGTGGGCAACCACAAGATAACTTCAATGGAAGAACTGCGCCAAACTAA 1299 0.4319 MAHLTTDSPLSRSIVRAFLDFLNLVEPAPGVDVEGLEVARECLTEVFKLNTSPTDVHTKSVSLIDIFKSLESNKQCEAGQSDDGKQPDDMDASGSFSAHNADHTQKHSEDGDWTRWSRTFGVSKDELCGQFFNALEKVHFFRTNPDGTDDPVQLEKASRIFNDAVMEMESSECQEFSLKNLAELLKSQGNKAMQSKQYLDAIDLYNCAIALCGENAVYYCNRAAAYTQIHKYTEAIQDCLKSTEIDPNYSKAYSRLGLAYYAQGNYRDAIDKGFRKALLLDPSNESIKENIQVAEHKLIEEQHRADHSQNSRSSQESQNQSTRGSRSNAAPPLFNSMPFNANDLASMFMNIAANTASAYQGQHPEEQQGEDSNTNSSNEPEIRIGSNINLNLNQMPEEMTGTLRTVMEMLSGAAPPGRGQPQDNFNGRTAPN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0429 432 MobiDBLite consensus disorder prediction 302 335 - -
Prci2g0429 432 MobiDBLite consensus disorder prediction 360 387 - -
Prci2g0429 432 SUPERFAMILY TPR-like 181 295 IPR011990 GO:0005515
Prci2g0429 432 Gene3D Tetratricopeptide repeat domain 177 331 IPR011990 GO:0005515
Prci2g0429 432 Gene3D Immunoglobulin FC, subunit C 5 73 - -
Prci2g0429 432 SMART tpr_5 182 215 IPR019734 GO:0005515
Prci2g0429 432 SMART tpr_5 216 249 IPR019734 GO:0005515
Prci2g0429 432 SMART tpr_5 250 284 IPR019734 GO:0005515
Prci2g0429 432 MobiDBLite consensus disorder prediction 76 111 - -
Prci2g0429 432 ProSiteProfiles TPR repeat profile. 250 284 IPR019734 GO:0005515
Prci2g0429 432 Coils Coil 284 304 - -
Prci2g0429 432 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 177 329 - -
Prci2g0429 432 MobiDBLite consensus disorder prediction 410 432 - -
Prci2g0429 432 Pfam Tetratricopeptide repeat 216 249 IPR001440 GO:0005515
Prci2g0429 432 PANTHER LD24721P 1 413 IPR047150 -
Prci2g0429 432 ProSiteProfiles TPR repeat profile. 216 249 IPR019734 GO:0005515
Prci2g0429 432 MobiDBLite consensus disorder prediction 311 335 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0429 181 278 U-box Gene Family AT3G07370 32.653 1.73e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0429 K16365 - gmx:100799770 557.755