Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0412 ATGGCGGATTCAAGGGTGGAGACCATATCAAGGCTAGCCCAATGGAAGATTGACAATTTTGGACCTTGCTCCTACAAGAAATCCGATCCTTTCAAGGTCGGAATCTGGAACTGGTATTTATCTATAGAGAGGAATAGGTACCTGTACATACATCTATTTCCTGAGCCTTCCCGGGCTTCTAAGGAACACCCACCCATTGCTCGATTCATTCTCCGAGTTTCTAATACTGGCTCTTCCCGCAGATTCTACATTTCTCCTGTTCATGAACGACTGCTCAGAACATGTGATGACTTTGTCTGGCCTGTTGATACCTCATTTGTTGGTCGCTTCATTATTGATGTTGAATTCCTTGACCTGAAGATCTGTCCTTTGAATGGTGGAGAAGCTAGTTCTATATGGCCGTCTGATGGAAAATTGCAATCTGTTGCTGCGCAAAGTACCCTCCAATGCCTCTCTCGCATGCTTGATGAGGGCATACATGCTGATCTCACCATTAACACCGCAGATGGTACATTGAGAGCTCACAAGGCAGTTTTATCTGCAAGTTCTCCTGTGTTTCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAATCATCTACCATCCACATAGAAGACATGTCTCTAGAATCTTGTATGGCTCTACTAAGTTACTTATATGGCACAATAAAGCAAGAAGATTTCTGGAAGCACCGGCTTGCGTTGCTTGGAGCAGCCAATAAATATGACATTACTGGTCTTAAAGACACCTGCGAGGAAAGCTTATTGGAAGATCTCAACTCAGGAAATGTCCTTGAGAGGCTACACGAGGCATGGCTTTATCAGCTGCACAAGTTAAAGAAAGGGTGCTTGACGTTCCTATTTGATTTTGGTAAGATATATGACGTTAGAGAAGAAATGAATAACTTCTTCAGGCATGCAGATAGGGAGCTGATGATTGAGATGTTTCAGGAGGTGCTTACAATTTGGAAACCAGTATAG 981 0.4312 MADSRVETISRLAQWKIDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRASKEHPPIARFILRVSNTGSSRRFYISPVHERLLRTCDDFVWPVDTSFVGRFIIDVEFLDLKICPLNGGEASSIWPSDGKLQSVAAQSTLQCLSRMLDEGIHADLTINTADGTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCMALLSYLYGTIKQEDFWKHRLALLGAANKYDITGLKDTCEESLLEDLNSGNVLERLHEAWLYQLHKLKKGCLTFLFDFGKIYDVREEMNNFFRHADRELMIEMFQEVLTIWKPV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0412 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Prci2g0412 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Prci2g0412 326 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Prci2g0412 326 SUPERFAMILY POZ domain 143 257 IPR011333 -
Prci2g0412 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Prci2g0412 326 CDD MATH 15 101 IPR002083 GO:0005515
Prci2g0412 326 PANTHER OS08G0495500 PROTEIN-RELATED 1 325 IPR044714 -
Prci2g0412 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0412 Prci-Chr2 2957303 2960539 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Prci2g0412 BTB 4.9e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0412 K10523 - qsa:O6P43_015179 597.43