Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0408 ATGCATAATATGGAGACGGGGAGAGTGGCGGCTACGACGGAGAATTCTTTAACGCTGAGAATGAAGACGGATGCGGAATCGGATGCTGAGGATAGTATTGAACTGCACAAGGAAGAAGATCTGCACCATTTCCATGTCTTGGCAGTCGATGACAGTCTCATCGACCGCAAACTTCTCGAGAAGCTCCTCCAGGTCTCTTCGTGCAAAGTGACGAGTGTGGACTCCGGCGACAAGGCTTTGAAATATCTCGGTCTTCTTGATGATCTTGATAATGCTTCTTCAACTTCTTCCGACTCATCACCGTCCTCTTCTCACTCACCCCGACAAGAGGCAATGAAAGTGAATTTGATCATGACGGACTACTGCATGCCAGGGATGAGTGGCTATGATTTGCTTAAACGAGTCAAGGGATCTTCTTGGAAACACGTACCAGTGGTGATCATGTCATCAGAGAATGTACCATCCAGAATCAGCATGTGCTTGGAAGGAGGAGCAGAGGAGTTTCTATTGAAGCCACTGAAGTTATCAGACCTGAAGAAGCTTCAGCCGTACCTTGTGAAGTCCCTCAATAAGAATACGAATAATTCAAGCGAACAAGAATCTGGTAACAGTGACGTAGCAACCGACAATGACTGCAATCCCAACAGTAATAACAGCAATTGTATCGCCAAAAGGAAGGCCATGTCTCCTCAACCTTCTGACAGACCCAGACCCAAATTCAAAGGCTTGGCGGTCGTGTAA 741 0.4683 MHNMETGRVAATTENSLTLRMKTDAESDAEDSIELHKEEDLHHFHVLAVDDSLIDRKLLEKLLQVSSCKVTSVDSGDKALKYLGLLDDLDNASSTSSDSSPSSSHSPRQEAMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKHVPVVIMSSENVPSRISMCLEGGAEEFLLKPLKLSDLKKLQPYLVKSLNKNTNNSSEQESGNSDVATDNDCNPNSNNSNCIAKRKAMSPQPSDRPRPKFKGLAVV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0408 246 ProSiteProfiles Response regulatory domain profile. 45 186 IPR001789 GO:0000160
Prci2g0408 246 Gene3D - 45 215 - -
Prci2g0408 246 SUPERFAMILY CheY-like 43 181 IPR011006 -
Prci2g0408 246 PANTHER TWO-COMPONENT RESPONSE REGULATOR 44 216 IPR045279 GO:0009736
Prci2g0408 246 MobiDBLite consensus disorder prediction 191 246 - -
Prci2g0408 246 SMART REC_2 44 182 IPR001789 GO:0000160
Prci2g0408 246 CDD REC_typeA_ARR 46 181 - -
Prci2g0408 246 MobiDBLite consensus disorder prediction 191 226 - -
Prci2g0408 246 Pfam Response regulator receiver domain 46 180 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0408 Prci-Chr2 2901191 2903922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0408 43 244 Response Regulator Gene Family AT3G57040 48.035 1.27e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci2g0408 Response_reg 3.5e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0408 K14492 - gmx:100786187 249.98