Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0402 ATGGCCGAGCGTGTGTCCCTCTCGCTTTCACTGCCCTCACCATCCCCCCGGTCTCCCCCCAAAATGGCCGCTTTTGGTGGCGCCTCCGCCACCGCCTCTTCTCGATTCCTCTCCTCCTCATTCAGAGCCTCCCTCTCCCTTGCCGCTTCTGCTCCTTCACCTTCCCTTTTCTATTCCTCATCCTCCTCGTCTGGCCTCAGATCCTCCCCTCGCATTTCCCATCTCTTTCTCCATCAGCGAAGAGCTGAGGCTCGTGTATCGCGGAGAGGATACGTCACAGTCTCTGCGCCCAAGTCGTTTGCATCTGATCCCGATCAGTTGAAGAGCGCTAGAGAGGATATTAAGCAGATTCTCAGGACTAAGTTCTGCCATCCAATACTGATTCGCCTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAGTGGCCTCAGAGAGGTGGGGCTAATGGTAGCTTGAGATTTGATGTTGAGCTGAAACATGCAGCCAATGCTGGACTTGTAAATGCATTGAATCTTCTCAAGCCAATCAAAGACAAGTACTCTGGTGTGACATATGCTGATTTATTTCAGCTGGCTAGCGCTACTGCTGTAGAGGAGGCTGGAGGCCCAAAAATCCCTATGAAATACGGAAGAGTGGATGTCTCTGGACCCGAAGAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGTCCCCCTTCACCTGCTGACCATTTACGGCAAGTGTTCTACAGGATGGGCTTAAATGACAAGGAAATAGTTGCACTATCTGGTGCGCACACCCTGGGGAGGTCTCGACCAGAACGTAGTGGGTGGGGCAAGCCTGAGACTAAGTATACGAAAGATGGGCCAGGAGCCCCTGGTGGGCAATCTTGGACAGTGCAATGGTTGAAGTTTGATAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAGAATCTATTGATCTTGCCAACTGATGCTGTTCTCTTTGAGGATCCATCATTTAAGGTCTATGCTGAAAAGTATGCTGCAGATCAGGAAGCATTCTTTAAAGATTATGCTCAAGCTCATGCCAAACTCAGTAACCTTGGAGCTAAATTTGATCCTCCCGAGGGCATTGTGATTGATGATGTATCTTCAAAGGCTGACAAGTTTGAAGCAGTCAAGTGCTCGCCTGGAATGGTTGCACTATTGCATCACTTATCAATTTTTCATTCTCATGTTGACGATGATTATAGAAATTTTTAA 1239 0.4818 MAERVSLSLSLPSPSPRSPPKMAAFGGASATASSRFLSSSFRASLSLAASAPSPSLFYSSSSSSGLRSSPRISHLFLHQRRAEARVSRRGYVTVSAPKSFASDPDQLKSAREDIKQILRTKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFDVELKHAANAGLVNALNLLKPIKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVSGPEECPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDENLLILPTDAVLFEDPSFKVYAEKYAADQEAFFKDYAQAHAKLSNLGAKFDPPEGIVIDDVSSKAXDKFEAVKCSPGMVALLHHLSIFHSHVDDDYRNF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0402 413 MobiDBLite consensus disorder prediction 211 240 - -
Prci2g0402 413 Gene3D - 110 363 - -
Prci2g0402 413 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 93 364 IPR044831 GO:0004601|GO:0034599
Prci2g0402 413 FunFam L-ascorbate peroxidase T, chloroplastic 232 355 - -
Prci2g0402 413 ProSiteProfiles Plant heme peroxidase family profile. 127 371 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 110 234 - -
Prci2g0402 413 Pfam Peroxidase 111 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Plant ascorbate peroxidase signature 204 216 IPR002207 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Plant ascorbate peroxidase signature 185 203 IPR002207 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Plant ascorbate peroxidase signature 103 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Plant ascorbate peroxidase signature 124 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Plant ascorbate peroxidase signature 323 347 IPR002207 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 MobiDBLite consensus disorder prediction 1 26 - -
Prci2g0402 413 CDD ascorbate_peroxidase 95 365 - -
Prci2g0402 413 ProSitePatterns Peroxidases proximal heme-ligand signature. 254 264 IPR019793 -
Prci2g0402 413 Gene3D Peroxidase, domain 2 232 355 - -
Prci2g0402 413 MobiDBLite consensus disorder prediction 266 289 - -
Prci2g0402 413 SUPERFAMILY Heme-dependent peroxidases 103 363 IPR010255 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Haem peroxidase superfamily signature 186 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Haem peroxidase superfamily signature 204 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Haem peroxidase superfamily signature 124 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci2g0402 413 PRINTS Haem peroxidase superfamily signature 294 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0402 Prci-Chr2 2869109 2874644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0402 186 363 Peroxidase AT4G17690 33.498 1.23e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0402 K00434 - gmx:100802238 604.749