Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0398 ATGGCATCGGCAGATCTCCAGCTTCCGCCCGGCTTCAGATTCCACCCCACGGACGAGGAGCTCGTGATGCACTATCTCTGTCGTAAATGTGCATCGCAGCAGATCGCTGTTCCGATTATTGCAGAAATCGATCTCTACAAGTACGATCCTTGGGACCTTCCTGGCCTGGCCATGTATGGGGAGAAGGAGTGGTATTTCTTCTCGCCGAGAGACCGCAAATATCCGAACGGTTCGAGGCCGAACCGGGCAGCGGGGACCGGCTACTGGAAGGCGACCGGAGCGGATAAGCCCATCGGTCATCCGAAACCTGTTGGGATCAAGAAAGCTTTGGTATTTTACGCAGGAAAAGCGCCCAAAGGCGAGAAAACAAATTGGATCATGCACGAATATCGTCTCGCGGATGTGGATCGTTCTGCTCGCAAAAAGAATAGCTTGAGGCTAGATGACTGGGTGCTTTGCCGTATCTACAACAAGAAAGGCACCATCGAGAAGCAACCGGGTGCTCTCAGCCGGAAAACCGAGTCCTCAGAAATCGAGGAGGAGAAGCCACAGAATTTGACCCGGGGGGGCGCGCTTCTTCCTCCCCCACCGCCGCCAGCTCAAGCGCCATCGGCGATGACAGATTACATGTACTTTGACACTTCGGATTCGGTCCCGAAGCTGCACACGGATTCGAGCTGTTCGGAGCAAGTGGTGTCGCCGGAATTCGCGAGCGAGGTTCAGAGCGAGCCCAAGTGGAATGAGTGGGAGAAGAACCTTGAGTTTCCATATAATTACGTGGATACCACTGTGGGCAATCATGGCTTCGGATCGCAATTTCAGGGTGGCAGTCAGATGTCGCCGTTACAGGACATGTTCATGTATCTGCAGAAGCCCTTCTGA 882 0.5408 MASADLQLPPGFRFHPTDEELVMHYLCRKCASQQIAVPIIAEIDLYKYDPWDLPGLAMYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTIEKQPGALSRKTESSEIEEEKPQNLTRGGALLPPPPPPAQAPSAMTDYMYFDTSDSVPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKNLEFPYNYVDTTVGNHGFGSQFQGGSQMSPLQDMFMYLQKPF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0398 293 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Prci2g0398 293 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Prci2g0398 293 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Prci2g0398 293 FunFam NAC transcription factor 17 162 - -
Prci2g0398 293 PANTHER NAC TRANSCRIPTION FACTOR 56 8 215 - -
Prci2g0398 293 MobiDBLite consensus disorder prediction 165 200 - -
Prci2g0398 293 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0398 Prci-Chr2 2826903 2829077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0398 6 293 NAC Transcription Factor Family AT1G01720 74.247 4.33e-153 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci2g0398 NAM 4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0398 - - mnt:21396546 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0525 15 3396038 3400814 Prci2g0398 2 2826903 2829077 CCT