Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0394 ATGGAGAAGATGGAAAGGCAGCGTGAGCAAGACGGTGAAGCAGCCCCCTCATGGAGTGTCGTTGAAGATGCAAGCAATCGTATAGCACCAGCACCTAATGTTGGTGACGGTTTCTCTGGTCAAAAGAATCCCGTGTGGAGGGAGTTTCTACCCTATGTAGGTCCTGGTTTTCTGGTGTCCCTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTACAAGCTGGAGCTACCCACAGATACGAGCTGCTGTGGGTGGTACTTATCGGGCTATTTTTTGCTCTCATAATTCAGTCATTGGCTGCAAATCTCGGCGTAACCACCGGGAAACACCTTTCAGAATTATGTAAAGTGGAGTACCCACCACTAGTGAAGTACTGCCTCTGGTTGCTGGCTGAGGTCGCCGTCATAGCTGCAGATATAGCCGAAGTTATTGGCACAGCCTTTGCGCTCAACATACTGTTCCACGTCCCACTATGGGCAGGAGTTCTCTTGACTGGCTTCTCTACTCTCTTGCTTCTCGGTCTCCAGAGATTTGGGGTCAGGAAGCTGGAATTGCTGATATCAACGCTAGTATTCACAATGGCAGGATGCTTCTTTGCGGAAATGAGCTATGTAAAACCACCAGCTTCTGATGTATTGAAAGGAATGTTTGTCCCTAGACTTAATGGCGATGGAGCCACCGCTGACGCCATTGCCCTTTTCGGAGCACTCATCATGCCGCACAACCTCTTTCTCCATTCTGCGCTTGTGCTCTCCAGAAAAGTACCCGGCTCCGTCCGTGGCATCAATAATGCGTGCAGATACTTTCTAATAGAAAGTGGGTTCGCTCTGTTTGTAGCATTTCTAATAAACGTAGCAGTAGTTTCAGTATCTGGCGCCGTATGCTCAGGAAATAATCTTTCAGCTCAAGATGCAGAAAGATGCAACGATCTCTCCCTTGATTCTGCTTCTTTCCTTCTCAAGAATGTTTTGGGAAGGTCCAGCTCAACAGTTTATGCCATAGCACTTCTGGCCTCTGGACAAAGCTCTACCATCACTGGCACCTATGCAGGGCAGTATATCATGCAGGGATTCTTGGATTTGAGGATGAAGAAATGGATAAGGAATTTGATGACTAGGAGTGTTGCCATAGTACCGAGTCTTGTTGTTGCCGTCATAGGCGGATCTTCGGGTGCAAGCCGCCTTATTATCATTTCCTCGATGATACTTTCGTTTGAGCTTCCATTTGCATTGATTCCACTGCTCAAGTTTAGCAGCAGCAGTACCAAGATGGGACCTCACAAGAATTCTAGAATTATCATTGTGATTTCATGGATCCTAGGCTCGGGAATCATTGGGGTCAACGTATACTACCTCAGCACAGGCTTTGTGGGTTGGTTGATTCACAGCAGTCTCCCGAAGGTGGCAAATGTATTCATAGGGATTTTAGTATTTCCTCTTATGGCCATTTATGTTGTTGCCGTCATCTACCTCACCTTTAGAAAAGACACCGTCAAGACCTTCATAGAGACTCGAAACGACAGTGTAGTGCCGACCCAGATGGAAAAGGGTCTCGTTAATGCTAATGACCAATTGGAATTGGGTCGAGTTCCTTTTAGACAAGATTTAAGGGATATCCAACTTCCCGCTTAA 1635 0.4673 MEKMERQREQDGEAAPSWSVVEDASNRIAPAPNVGDGFSGQKNPVWREFLPYVGPGFLVSLAYLDPGNLETDLQAGATHRYELLWVVLIGLFFALIIQSLAANLGVTTGKHLSELCKVEYPPLVKYCLWLLAEVAVIAADIAEVIGTAFALNILFHVPLWAGVLLTGFSTLLLLGLQRFGVRKLELLISTLVFTMAGCFFAEMSYVKPPASDVLKGMFVPRLNGDGATADAIALFGALIMPHNLFLHSALVLSRKVPGSVRGINNACRYFLIESGFALFVAFLINVAVVSVSGAVCSGNNLSAQDAERCNDLSLDSASFLLKNVLGRSSSTVYAIALLASGQSSTITGTYAGQYIMQGFLDLRMKKWIRNLMTRSVAIVPSLVVAVIGGSSGASRLIIISSMILSFELPFALIPLLKFSSSSTKMGPHKNSRIIIVISWILGSGIIGVNVYYLSTGFVGWLIHSSLPKVANVFIGILVFPLMAIYVVAVIYLTFRKDTVKTFIETRNDSVVPTQMEKGLVNANDQLELGRVPFRQDLRDIQLPA 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0394 544 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 24 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 PRINTS Natural resistance-associated macrophage protein signature 341 360 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 PRINTS Natural resistance-associated macrophage protein signature 369 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 PRINTS Natural resistance-associated macrophage protein signature 401 420 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 PRINTS Natural resistance-associated macrophage protein signature 128 154 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 PRINTS Natural resistance-associated macrophage protein signature 156 175 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 PRINTS Natural resistance-associated macrophage protein signature 181 202 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 PRINTS Natural resistance-associated macrophage protein signature 231 254 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 Hamap Divalent metal cation transporter MntH [mntH]. 33 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 47 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g0394 544 NCBIfam Nramp family divalent metal transporter 54 420 - -
Prci2g0394 544 Pfam Natural resistance-associated macrophage protein 70 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0394 Prci-Chr2 2785149 2788458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0394 23 543 Inorganic Solute Cotransporters AT1G15960 58.034 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0394 K21398 - gmx:100787785 796.578