Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0392 ATGTCAAACCAGAATCGTCGTTCGTCGTTTTCTTCCTCCACGACATCGTCGTTGGCGAAGCGGCATGCGTCATCCTCGTCGTCGGAGAATGTGGGGAAGCCTACTTCCCTGCCTCCACATTTGGCCAAGAAGCGCGCGCCTCTCGCTAACTTGACCAATCTAAAGAATGTGCCTCACGCTGCTTCACGGAACTCTCTGCCATCATCAACTCTGGTACCTGGTGCAACTAAAATCGCTAAGACAAACAAGGAACCCACCTCATCGAACGTGAAATCAAGTGCAGTTGTGTTCCCTGAGGTCAGCTCATTTACACAAAAGGATGAAGCTGTTCCTACAGTTGCAGCTTTCACCGTTCCAGTTTCTACCAACTTCAATGCAAAATCAAGTGCCATTGATTTTCCCAAGTTTGCTCCTGTTCCACAGAAGTTCGAAGCTGCTCCTTCAGTTTCCAACTCCTCCGTCCCTCTTGCAAGCAGCATGGATGTTTCTCCTTGTAAATCAGATGGCATGTCTGTCTCTCTGGACGAGACCATGTCTACTTGCGACTCATTCAACAGTCCTGAAGTTGAATATATGGACAATAACGATGTTTCAGCTGTTGACTCTATTGGTAGAAAGACATTGGACATTCTAAACATCTCCGATAATACAGATAGAACAATAGGCAACATTTGTAACAGAGACATTCTTGTTGAGCTGGAGAGAGAAGACAAAATTGTCAATATCGATAATAATTACGTGGATCCACAGCTCTGTGCGACCTTTGCTTGTGACATCTACAAGCATTTGCGCGTATCTGAGGCAAAGAAAAGGCCGTCTACAGATTACATGGAGAGAGTTCAAAAGGACATAAATCCCAGCATGCGTGCTATATTGATTGACTGGCTTGTAGAGGTGGCTGAAGAGTACCGGCTTGTGCCTGATACATTGTATTTGACAGTGAACTACATAGATCGGTATCTTTCAGGGAATGCCATGAACAGGCAAAAATTGCAATTACTTGGAGTTGCCTGCATGATGATTGCCTCTAAATATGAGGAGATTTGCGCGCCTCAGGTGGAAGAATTCTGCTATATAACTGATAACACGTACTTCAAAGAGGAGGTTTTGCAAATGGAATCAGCGGTGTTGAATTTTCTGAAATTCGAAATGACAGCCCCAACAACCAAATGTTTCTTGAGACGATTCGTTCGCGCAGCTCAAGGAGTGAATGAGGTCCCGTCATTGCAACTAGATTGCCTGGCCAACTACCTTGCCGAACTGTCTCTCTTGGAGTACAGCATGCTTTGTTATGCCCCATCACTTATAGCTGCTTCTGCAATTTTCCTCGCCAAATATCTACTCTTCCCTTCGACCAAACCCTGGAATTCCACATTGCAACATTATACACTTTACCAGCCTTCTGATCTGTGTGACTGCGTGAGGGATCTCCATCGTCTGTGTTGCAACACCCATACTTCTAATTTACCCGCAATCCGAGAGAAATACAGTCAGCACAAGGTGGAATTCTTGCTGGCATGTTTTTCAGTTCGTTTGTTTCATAGTAATAATCTGTTTGCTTCGATACCTTACTTGGATTTCATTCTTGTTTCAGTACAAATATGTGGCTAA 1611 0.4444 MSNQNRRSSFSSSTTSSLAKRHASSSSSENVGKPTSLPPHLAKKRAPLANLTNLKNVPHAASRNSLPSSTLVPGATKIAKTNKEPTSSNVKSSAVVFPEVSSFTQKDEAVPTVAAFTVPVSTNFNAKSSAIDFPKFAPVPQKFEAAPSVSNSSVPLASSMDVSPCKSDGMSVSLDETMSTCDSFNSPEVEYMDNNDVSAVDSIGRKTLDILNISDNTDRTIGNICNRDILVELEREDKIVNIDNNYVDPQLCATFACDIYKHLRVSEAKKRPSTDYMERVQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTTKCFLRRFVRAAQGVNEVPSLQLDCLANYLAELSLLEYSMLCYAPSLIAASAIFLAKYLLFPSTKPWNSTLQHYTLYQPSDLCDCVRDLHRLCCNTHTSNLPAIREKYSQHKVEFLLACFSVRLFHSNNLFASIPYLDFILVSVQICG 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0392 536 SUPERFAMILY Cyclin-like 387 501 IPR036915 -
Prci2g0392 536 CDD CYCLIN_AtCycA-like_rpt2 387 500 - -
Prci2g0392 536 Gene3D - 258 501 - -
Prci2g0392 536 SMART cyclin_7 294 378 IPR013763 -
Prci2g0392 536 SMART cyclin_7 391 479 IPR013763 -
Prci2g0392 536 MobiDBLite consensus disorder prediction 1 34 - -
Prci2g0392 536 MobiDBLite consensus disorder prediction 54 73 - -
Prci2g0392 536 ProSitePatterns Cyclins signature. 289 320 IPR006671 -
Prci2g0392 536 PANTHER CYCLINS 193 498 IPR039361 -
Prci2g0392 536 CDD CYCLIN_AtCycA_like_rpt1 248 383 - -
Prci2g0392 536 MobiDBLite consensus disorder prediction 1 45 - -
Prci2g0392 536 MobiDBLite consensus disorder prediction 55 73 - -
Prci2g0392 536 FunFam Cyclin A1 374 504 - -
Prci2g0392 536 Pfam Cyclin, N-terminal domain 258 384 IPR006671 -
Prci2g0392 536 SUPERFAMILY Cyclin-like 248 384 IPR036915 -
Prci2g0392 536 SMART Cyclin_C_2 387 508 IPR004367 -
Prci2g0392 536 Gene3D - 272 385 - -
Prci2g0392 536 Pfam Cyclin, C-terminal domain 387 502 IPR004367 -
Prci2g0392 536 FunFam Mitotic cyclin 6 272 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0392 Prci-Chr2 2750323 2754417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0392 1 508 Core Cell Cycle Gene Families AT1G44110 59.766 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0392 K06627 - qsu:112028095 696.041