Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0391 ATGTCAAACCAGAATCGTCGTTCGTCGTTTTCTTCCTCCACGACATCGTCGTTGGCGAAGCGGCATGCGTCATCCTCGTCGTCGGAGAATGTGGGGAAGCCTACTTCCCTGCCTCCACATTTGGCCAAGAAGCGCGCGCCTCTCGCTAACTTGACCAATCTAAAGAATGTGCCTCACGCTGCTTCACGGAACTCTCTGCCATCATCAACTCTGGTACCTGGTGCAACTAAAATCGCTAAGACAAACAAGGAACCCACCTCATCGAACGTGAAATCAAGTGCAGTTGTGTTCCCTGAGGTCAGCTCATTTACACAAAAGGATGAAGCTGTTCCTACAGTTGCAGCTTTCACCGTTCCAGTTTCTACCAACTTCAATGCAAAATCAAGTGCCATTGATTTTCCCAAGTTTGCTCCTGTTCCACAGAAGTTCGAAGCTGCTCCTTCAGTTTCCAACTCCTCCGTCCCTCTTGCAAGCAGCATGGATGTTTCTCCTTGTAAATCAGATGGCATGTCTGTCTCTCTGGACGAGACCATGTCTACTTGCGACTCATTCAACAGTCCTGAAGTTGAATATATGGACAATAACGATGTTTCAGCTGTTGACTCTATTGGTAGAAAGACATTGGACATTCTAAACATCTCCGATAATACAGATAGAACAATAGGCAACATTTGTAACAGAGACATTCTTGTTGAGCTGGAGAGAGAAGACAAAATTGTCAATATCGATAATAATTACGTGGATCCACAGCTCTGTGCGACCTTTGCTTGTGACATCTACAAGCATTTGCGCGTATCTGAGGCAAAGAAAAGGCCGTCTACAGATTACATGGAGAGAGTTCAAAAGGACATAAATCCCAGCATGCGTGCTATATTGATTGACTGGCTTGTAGAGGTGGCTGAAGAGTACCGGCTTGTGCCTGATACATTGTATTTGACAGTGAACTACATAGATCGGTATCTTTCAGGGAATGCCATGAACAGGCAAAAATTGCAATTACTTGGAGTTGCCTGCATGATGATTGCCTCTAAATATGAGGAGATTTGCGCGCCTCAGGTGGAAGAATTCTGCTATATAACTGATAACACGTACTTCAAAGAGGAGGTTTTGCAAATGGAATCAGCGGTGTTGAATTTTCTGAAATTCGAAATGACAGCCCCAACAACCAAATGTTTCTTGAGACGATTCGTTCGCGCAGCTCAAGGAGTGAATGAGGTCCCGTCATTGCAACTAGATTGCCTGGCCAACTACCTTGCCGAACTGTCTCTCTTGGAGTACAGCATGCTTTGTTATGCCCCATCACTTATAGCTGCTTCTGCAATTTTCCTCGCCAAATATCTACTCTTCCCTTCGACCAAACCCTGGAATTCCACATTGCAACATTATACACTTTACCAGCCTTCTGATCTGTGTGACTGCGTGAGGGATCTCCATCGTCTGTGTTGCAACACCCATACTTCTAATTTACCCGCAATCCGAGAGAAATACAGTCAGCACAAGTACAAATATGTGGCTAAGAAGTATATTCGTCCATCAATACCTCAAGAATTTTTTCAGAGTTGA 1563 0.4466 MSNQNRRSSFSSSTTSSLAKRHASSSSSENVGKPTSLPPHLAKKRAPLANLTNLKNVPHAASRNSLPSSTLVPGATKIAKTNKEPTSSNVKSSAVVFPEVSSFTQKDEAVPTVAAFTVPVSTNFNAKSSAIDFPKFAPVPQKFEAAPSVSNSSVPLASSMDVSPCKSDGMSVSLDETMSTCDSFNSPEVEYMDNNDVSAVDSIGRKTLDILNISDNTDRTIGNICNRDILVELEREDKIVNIDNNYVDPQLCATFACDIYKHLRVSEAKKRPSTDYMERVQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTTKCFLRRFVRAAQGVNEVPSLQLDCLANYLAELSLLEYSMLCYAPSLIAASAIFLAKYLLFPSTKPWNSTLQHYTLYQPSDLCDCVRDLHRLCCNTHTSNLPAIREKYSQHKYKYVAKKYIRPSIPQEFFQS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0391 520 SUPERFAMILY Cyclin-like 248 384 IPR036915 -
Prci2g0391 520 FunFam Mitotic cyclin 6 272 372 - -
Prci2g0391 520 Gene3D - 272 385 - -
Prci2g0391 520 PANTHER CYCLINS 193 498 IPR039361 -
Prci2g0391 520 SMART cyclin_7 294 378 IPR013763 -
Prci2g0391 520 SMART cyclin_7 391 479 IPR013763 -
Prci2g0391 520 MobiDBLite consensus disorder prediction 1 34 - -
Prci2g0391 520 MobiDBLite consensus disorder prediction 54 73 - -
Prci2g0391 520 ProSitePatterns Cyclins signature. 289 320 IPR006671 -
Prci2g0391 520 Pfam Cyclin, N-terminal domain 258 384 IPR006671 -
Prci2g0391 520 Gene3D - 258 506 - -
Prci2g0391 520 Pfam Cyclin, C-terminal domain 387 506 IPR004367 -
Prci2g0391 520 CDD CYCLIN_AtCycA-like_rpt2 387 501 - -
Prci2g0391 520 CDD CYCLIN_AtCycA_like_rpt1 248 383 - -
Prci2g0391 520 MobiDBLite consensus disorder prediction 1 45 - -
Prci2g0391 520 MobiDBLite consensus disorder prediction 55 73 - -
Prci2g0391 520 SMART Cyclin_C_2 387 510 IPR004367 -
Prci2g0391 520 SUPERFAMILY Cyclin-like 387 509 IPR036915 -
Prci2g0391 520 FunFam Cyclin A1 374 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0391 Prci-Chr2 2750323 2754417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0391 1 518 Core Cell Cycle Gene Families AT1G44110 60.536 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0391 K06627 - qsu:112028095 725.317