Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0384 ATGGGCTCGTGTGGGAAATCAAGCGTATTAGAAGACGCCTCAAGCGGGCCTGTTATTGAGCAGCATTCACACGCAGAGTTTCCATTGCAGTCTATTCCTTTGCAGCCGTCTTGTCCAGTACTAACTTGCAATGCGTTGGAATCTGATGTCAATCACTCCAATATGATGAAGGGATGTATGAATTCGTCTAGAGAGGCTCAGACTCGGTCTGCAAGCACCGTTGATGTTCCAGAGATGTCCAGAGATTCATTGGTGATGAACAAAAATGAAAATACTGATAGGTTACAATGCTCATGCACAGTAGTAAGTTGCGATGCCCGCTCTGATAAGATGGAAGGTTGTATGAATTCGACTGGAGAGGTCCACACAGAATCTTCAAGCTCCATTGATGCTCCAGAGATGTCCGGAGATTCATTGTTGATGGCAAACAAAACTGAAAATACTGATAGTTTACAATTGTCCTGTCCAGTAGTAACTAGCAATGCGTTGGGCTCTACTGTTGAGCACTCCAATATGATGAAAGGTTGTATGAATTCGTCTATAGAGGTCCACACAGGGTCTGCAAGCCCTGTTGATGTTCCAGAGGTGCCCAAAGATTCATTGTTGATGGTGAATAAAAATGAAAATACTGACATCTTACAACAGTCCTGTTCAGTAGTAACTTGCAATGTGTTGGACTCTAATGTTGATAATTCCAATATGATGGAAGGTTGTATGAATTTGTCTAGAGAGGTACACACTGGGTCTGCAGGCTCCATTGATGTTCAAGAGATGTCCAGAGATTCATTGTCGACGGTGAACAAAAATGAAAATACTGTTATGTTACAACAGTCCTGTCTAGTAGTAACTTCTGATGTGTTGGACTCTGTTGTTGATCTCTCCGATATGATGGAAGAAGGTTGTATGAGTTCGTCTTTAGAGGTCCACTCTAGGTCTGCTAGCCCGATCCATGCTTCAGAGATAACCAGAATTTCATTGTTGGAGAACAAAAGTGAAAATACTGATATTTTACAAGAGTCTTGTCTAGTAGCTACTTGCAATACGCTGGATTCTAATGTTGAGCACTCCAACCTGACAGGAGGTTGTATGAATTCGACTGGAGAGGTGGCAATTTCCATTGATGCTCCGGAGGTAATTAGAGATTCATCATTGATGGAGAACAAAAGTGAAAATACTGACAGTTCACAGCGGTCCTGTCTAGCAGTAACTTGCAATGCGTTGGACTCTAATGTTGAGTGCTCTGACATTATGGAAGGTTGTATGAATTCATCTAGAGAGGTCTATGCAGGGTCTGCAAGCCCTATTGATGTTCTAGAGATGTCCAAAGATTCATTGTTGACGGTGAATAGAAGTGAAAATACTGAGATGTCACTCCTGGAGAAAACCTCTGAGAATGATAGCCAGACTTGTCAGAGTACATTTTGTGCACAAATTGAACTTTCTAATCTAGAAAGTGTCAGGCTGGTGGCAGAAGGAAAACCTCATGCCGAAGATGGTATCAAAATGCCATCAGACTTCATATTGGCCAGTGGTTCACCTAAGAATTGTGTTCTTCAGGATGGGCAGAAGGATGAGAAGAACAACACGTTCCACTCTGCAGGAGTTTCTTTTGCACTCATGGAAGGTGAAAACGATGCTGGTTTTCCAACTGCAACCGGCTTCCTTGTTTGTTGCCACCAACAAAGTGAACAAGAGGACATAATGAGGAATGCTAATCCATTTTTGGAGGGCATGAACGAAGGTGATTTGATTTGTGGGATTGAATCAGATGCCTGCAAGCAGACTCATTCACAGGGCAGTGAAGTACCCACAGATGTAATACATACTGAAGCAGAGGCTATAAGTGATCAGCTGCATGATCAAAAAGATGGTGATGAGAATAGTCCTTATAAAGGCTTTGTTGATAAACAAAGTTTCATTGAGACACATGTCCAAGTATTCTCCTCATCAGGCCATCAAAGGATCTTGGGGAGTTTGCCTGTAGCTTATTCACCTGGTGAGGCTACCCACTCGGAGAAGGGGATTGATAATATTGATACTGATTTTGATGCAGAAGATGTTCTGAAAGTTAAGGGAAAAAATAATGATGTTATGACTGAAATAAATGTTGAAATGAAGAACAATATGTCGCATGCTGTTAATGCATACAAGTTAAATGACAGTTGCTCCAAAAAAGATGCCAACTGTACCTTGAGAAAAATGTTTCCTCCTGAATCAGATCTTCCTTCTCTTGATTATATCAGTATTAGCTCTCCAAAGGATGTGCCTGATCATCTCAAGGAGGTCAATGGTTCCATCGGTTATAGTAGCCTTGTGGGCAATTCTGGAGAGGCCGACAGTATTGGGAAAGATGTTATACAAGTTGATTGTAACTCTGAAAGCAATTATTCTGGGAATGCATCCTTGCCTATTCGAAGGACTAGTCGAAGAAGTAAATCTAATCGTAAGACACAGACTAAAAGAGCTTTGAGGAAATGCAAAAACAAAACCAGTGTGCCACTCCTAGGTGGGGATATGGAGATGATCTTGGAGGCTGCTAGAAAGAAAAGAAGCTGTTTCTCTAAACGAGCTCGTTCCTCTATCTGGGGATTGATAGGAAACATTAATAAGTTTTTTGAACAAGATAATGAGCTTGGAGTTGATAAAGTTATGGGTAAAGGATTGGGGAAGGTGAGAGGTGCCCGTAAAAGTGGCAAGAGAAACAAGAATGGTGCAATTTCTAGCTCATTGAGTTCAATGAAGAAATGCTGTGCTTCAACTACTCGTGTTCGTCTGAAGATTAAGCTGGGGAAAGAAGTTCAATTAAGTTGTTCAGATGTCCTGGTTCCAGAGGTTTTGAATGGTTCATATTCTGCTTCTAACGTGGGGCCTGGTCCAGCCTCTCAGGAAAGAAACAGCAATGCTGGAGATAAATTTTCAGAAGAGATTGCAGTAGACAAGCCTGAATCTTCATCAAACAACCTGGATGGAGATGCTCTTGTTGTGAATGGACAAATGGCAAATCACCTTTTGGAAGCTGCTGCAACAACAGAAAAATCAGATGGGTTCACAGAGGAACTATGCTATATGATTCCTCCCAAGAGGATGATTGAACCGTTGAGAGAGACAGTTAATGATAAGGAGATGGATCCTGGAACTTCACCTGATTCAGAAGTTATCAATTCAATTCCTGAAGCCGAGGTTGGAGAAAGACATCAACAAGGTTTGCATGATGCTGTTCTTGATTCTTCTAAAGTGTCTGATTCTCTTGGAGTGGTATCTGGTTGCAGGAGAGGGAAGAAGAAAGACAAGCTTACTTCTTCTAATAGTTCTATTGTTGGAGATGGCTCACAATGGCTACCGAGGAAAAATAAAACCAAGCACTCAAAGAATTGTGGACGTAAAAAGAATTCCAATGAAGTTGTTTGCTCCATAAGTTCACATGCTTCCCCTGATATAAATGCTGCGAGCAACTCAGTAAGCTATAAAGAATTATCCAGTGAATCATTGCCCCCATCTGGAGAGATTGAACTTGAAGACCCCACTGAGGCTTTGAAAGTCAAAAATAGCATGAAAGTTGAGACTACTTGTGGGCCAAATGACAATCATGGGCTTTTAGAATCCCAGGGCCTTGAGAATTTGCTGTCTTCAGCTAGATCCTCAGGTCGTAAACTTCCTAAAAGTCTTACATCTTGTAAAATTGGCACCCCTAAATCAAAAGCTTCTGAGTCAACGAGTGCGAAAAAGACTGGTAGCAGACGAAGAGAGAAACAACTGAAACCTATTAAGAGTGAAGTCAAGGGAAAAGCTGTCTCTGAAAAAGTTACCTCTCAAGCAGAAGATTGTCTGCGTGCAGAACCTGTTGATGGAAGTTATACGTTGGATGATATAAAAATTAATGCCGGTGACAAGAAGGCATCATTTAATGGATCCAATTTGGACATTTTAGTCGGTACCAGTTTGGAGGAGCAGCATCCATCACCTCATAATGCATGGGTGCGCTGTGATGATTGTCACAAGTGGCGGCGTATTCCTGTTGACCTTGCAGATCTAATTGAAGAAACAAAGTGCACCTGGACCTGTAAGGATAGCAACGATAAAGCCTTTTCTGATTGCTCTATCCCCCAAGAAAAGTCAAATGCAGAGATCAATGCAGAGTTGGGATTATCAGATGCTTCAGGTGAAGAAGATGCTTATGAAGGCTGTAAAAATTATAAGAAGTTGGAATATCAACACCCAACAGCTCACCAGGAATCAACTTTTACCCATATTCTTACTAACGAGTTTCTGCACCGCAACCGCAAAACTCAGACTATTGATGAGATAATGGTTTGCCATTGTAAACAACCATCAGTATAGTTTGGTTGTGGGGATGAGTGTCTAAATCGGATGCTCAACATTGAATGTGTTCAAGGAACCTGCCCATGTGGGGATCTTTGTTCAAATCAACAGTTCCAGCGACGCAAGTATGCCAGCTTGACGTGGTTTAAATGTGGGAAAAAAGGTTACGGGTTGAAGGCACTTGAGGATATATCTAAAGGGAAGTTTCTTATTGAATATGTTGGGGAGGTGCTTGATATGCATGCTTATGAGGCGCGGCAAAGAGAGTATGCTTTCAAGGGTCATCGGCATTTCTACTTCATGACATTGAATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGGCGATTCATTAATCATAGTTGTGATCCTAATTGCCGTACAGAAAAGTGGATGGTGAATGGTGAAATCTGTATTGGACTTTTTGCATTGAGGGATATTAAGCAGGGTGAAGAGGTGACATTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTCTATGTCGTGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAAGTCATTGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCAGTGATGCTTACTGAAGACGGTGAAATTGAAGGCAGCATGCCTAGATCTGATGTTATGCAAGCTGAAAGGAATTTGTCAAATGACAGAGATATAATTGAGAAGTCCATAAGTGATCGAGTGCCAGGTAATAATCAGGAGAAAGAGAACTCTTTAAACCCATCTCCTCCTGTTTCCCTGTTGCACTGCCCATTAGATGTGGAAGATTCAATGGGCAAATTGCCATCATCTGACATGGAAGAAATTTCTCGACAAATGGATGGTGTAATTAGTACATCCATGCCTACTGTACAACATGTGTCAACATCAGAGCTTCCTGACAATATTTCTTCCATCCAAAGAATGGAAGCTTCTGCTACACCTATTAGTAAAGTGATATCAAATTTTATTAAGAATAAAAGGGAATCCAAGTTTGAAATTGTTGAAGACAGGCCTGATTTTCCAAAAACACACCTGGTTGTGAAGACTTCTCGAGCAAATGGTTTGGTTAAAAAGGGAAAGGTTCATGCCAATCATTCAAATGGCCTCAAAGCTGCGGTGACAGCCAACAGATTGCAGGCAGCATGGATCAAACCTAAAAAGATGGTGGAAGGTTCTTCCAATGGCCGTTATGAAGCAGTTCAGGAGAAACTTAAGGAGTTGTTAGATGAAGATGGAGAAGGAGGAATAAGCAAAAGAAAAGATGCAACCAAAGGCTACTTAAAACTTCTGCTTCTCACTGTGGCATCAGATGATAGGAATAATGGCGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGGTGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAGAATGGTCTACAGATGTTGCATAACATTATGAAGCAATACAGACGGGATTTCAAGAAAACTCCCATACTACGGAAGCTTCTTAAGGTCTTAGAGTATCTAGCAGCAAGCAAGATATTGACATTTGAGCACATCAACAGCGGCCCTCCCTGTCATGGAATGGAGAGCTTTAGGGAGTCCATGTTGTCTCTGGCAGAGCATGATGACAAACAGGTGCATCAAATCGCTCGAAGCTTTCGGGACAGATGGATTCGTAGGCCTTTCAGAAGACATGGTTATGTGGACAGAGATGATTTTAAGGGAGAATCTTACAGGAATTTTAACTGCAATAGATTTTCAGCACCACAGAACCATAAGCGGGAGTTAGACGTTAGACCCACGGAAGCAATAGATTGTGCACAGCAATCAAAACCATTGACAACCTCGGCAGATGCTGGTGCCCAGGAGGGTTGCCCTGCACTGTCTTTAGATGGATGTAAAGTTGGTGGGACAAAAAGGCGCAAGCGTAAAAGCAGATGGGATCAACCTGCAGAGACAATATCAAACTTATCATCTAGTCCATGTAAGAGACAAAATTTTGATTCTGGGCTATCAATGCATGCTGATGCAGCTATTAAATGTTCTGATGGAAGTCAGAACATTAGTGAGGATTTTCCCCCTGGGTTTTCATGTCCTGTTCAACCGCAATTGGGTTCTTTGAATGCTTCACCTCGCCCTGTTGATCTTGCTTTGCAAAATGTGAGCAATTCTGGGTGTCCCCCACATACAGTAATTGGACATCCAAAGGAGAAATTTAATTCTTGCATGCCTGTGTCATACGGAATGCCATTATCTTTTGTCCAGCAGTGTGGCACGCCTCATGCTGAAATATCAGGGAGTTGGGTCAGTGCACCAGGTGTGCCTTTCAGCCCATTTCCCCCATTGCCCCCCTATCCGCGGGATAATAAAGACTGTCAACCTCCTAGTTCTACTAATGCTGCAACTGTAGATCAGCCTGTTGAAGTTCAGCAGCAGGATATGTGTGGTCCAGTTGGTTGTTACTCTGACGATATCACTCCCAGCACAGCCACTACTAGCCCAAAAGACATTGACCTTTCACGTGAAGATGATAAACAGCTTTACAAACGTTTGAGAGGTTCCTCCTGTGATTTGGGAAGGAAGTACTTTAGGCAGCAAAAATGGAATAATTCAAAAATACATCGACCCTGGTTCAGAAGGAATGCGTGGGGATCTAATGGGAACAGCACTGCTGGCAGTATATACCGTGTTAGTGTAGGAGATGAACCAAGTGAGTCAAAAGTTGCATATTCTTCAGAGGATGTAATCTGTAGAGCGGAGGAAGAATTTTACTTAGTCAAAAGCTCTATCCCTGGAGGAAGTTTATACCATTCCGCCTTTTGCTGTTTGAATATTGATCGAACCAAATCTTCATGA 7209 0.4192 MGSCGKSSVLEDASSGPVIEQHSHAEFPLQSIPLQPSCPVLTCNALESDVNHSNMMKGCMNSSREAQTRSASTVDVPEMSRDSLVMNKNENTDRLQCSCTVVSCDARSDKMEGCMNSTGEVHTESSSSIDAPEMSGDSLLMANKTENTDSLQLSCPVVTSNALGSTVEHSNMMKGCMNSSIEVHTGSASPVDVPEVPKDSLLMVNKNENTDILQQSCSVVTCNVLDSNVDNSNMMEGCMNLSREVHTGSAGSIDVQEMSRDSLSTVNKNENTVMLQQSCLVVTSDVLDSVVDLSDMMEEGCMSSSLEVHSRSASPIHASEITRISLLENKSENTDILQESCLVATCNTLDSNVEHSNLTGGCMNSTGEVAISIDAPEVIRDSSLMENKSENTDSSQRSCLAVTCNALDSNVECSDIMEGCMNSSREVYAGSASPIDVLEMSKDSLLTVNRSENTEMSLLEKTSENDSQTCQSTFCAQIELSNLESVRLVAEGKPHAEDGIKMPSDFILASGSPKNCVLQDGQKDEKNNTFHSAGVSFALMEGENDAGFPTATGFLVCCHQQSEQEDIMRNANPFLEGMNEGDLICGIESDACKQTHSQGSEVPTDVIHTEAEAISDQLHDQKDGDENSPYKGFVDKQSFIETHVQVFSSSGHQRILGSLPVAYSPGEATHSEKGIDNIDTDFDAEDVLKVKGKNNDVMTEINVEMKNNMSHAVNAYKLNDSCSKKDANCTLRKMFPPESDLPSLDYISISSPKDVPDHLKEVNGSIGYSSLVGNSGEADSIGKDVIQVDCNSESNYSGNASLPIRRTSRRSKSNRKTQTKRALRKCKNKTSVPLLGGDMEMILEAARKKRSCFSKRARSSIWGLIGNINKFFEQDNELGVDKVMGKGLGKVRGARKSGKRNKNGAISSSLSSMKKCCASTTRVRLKIKLGKEVQLSCSDVLVPEVLNGSYSASNVGPGPASQERNSNAGDKFSEEIAVDKPESSSNNLDGDALVVNGQMANHLLEAAATTEKSDGFTEELCYMIPPKRMIEPLRETVNDKEMDPGTSPDSEVINSIPEAEVGERHQQGLHDAVLDSSKVSDSLGVVSGCRRGKKKDKLTSSNSSIVGDGSQWLPRKNKTKHSKNCGRKKNSNEVVCSISSHASPDINAASNSVSYKELSSESLPPSGEIELEDPTEALKVKNSMKVETTCGPNDNHGLLESQGLENLLSSARSSGRKLPKSLTSCKIGTPKSKASESTSAKKTGSRRREKQLKPIKSEVKGKAVSEKVTSQAEDCLRAEPVDGSYTLDDIKINAGDKKASFNGSNLDILVGTSLEEQHPSPHNAWVRCDDCHKWRRIPVDLADLIEETKCTWTCKDSNDKAFSDCSIPQEKSNAEINAELGLSDASGEEDAYEGCKNYKKLEYQHPTAHQESTFTHILTNEFLHRNRKTQTIDEIMVCHCKQPSVFXFGCGDECLNRMLNIECVQGTCPCGDLCSNQQFQRRKYASLTWFKCGKKGYGLKALEDISKGKFLIEYVGEVLDMHAYEARQREYAFKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQGEEVTFDYNYVRVFGAAAKKCYCGSPLCRGYIGGGDPLNAEVIVQGDSDEEFPEPVMLTEDGEIEGSMPRSDVMQAERNLSNDRDIIEKSISDRVPGNNQEKENSLNPSPPVSLLHCPLDVEDSMGKLPSSDMEEISRQMDGVISTSMPTVQHVSTSELPDNISSIQRMEASATPISKVISNFIKNKRESKFEIVEDRPDFPKTHLVVKTSRANGLVKKGKVHANHSNGLKAAVTANRLQAAWIKPKKMVEGSSNGRYEAVQEKLKELLDEDGEGGISKRKDATKGYLKLLLLTVASDDRNNGEAIQSNRDLSMILGALLKTKSRAVLNDIINKNGLQMLHNIMKQYRRDFKKTPILRKLLKVLEYLAASKILTFEHINSGPPCHGMESFRESMLSLAEHDDKQVHQIARSFRDRWIRRPFRRHGYVDRDDFKGESYRNFNCNRFSAPQNHKRELDVRPTEAIDCAQQSKPLTTSADAGAQEGCPALSLDGCKVGGTKRRKRKSRWDQPAETISNLSSSPCKRQNFDSGLSMHADAAIKCSDGSQNISEDFPPGFSCPVQPQLGSLNASPRPVDLALQNVSNSGCPPHTVIGHPKEKFNSCMPVSYGMPLSFVQQCGTPHAEISGSWVSAPGVPFSPFPPLPPYPRDNKDCQPPSSTNAATVDQPVEVQQQDMCGPVGCYSDDITPSTATTSPKDIDLSREDDKQLYKRLRGSSCDLGRKYFRQQKWNNSKIHRPWFRRNAWGSNGNSTAGSIYRVSVGDEPSESKVAYSSEDVICRAEEEFYLVKSSIPGGSLYHSAFCCLNIDRTKSS 2403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0384 2403 PANTHER SET DOMAIN PROTEINS 825 2105 - -
Prci2g0384 2403 Gene3D - 1314 1378 - -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 115 135 - -
Prci2g0384 2403 SUPERFAMILY SET domain 1413 1623 IPR046341 -
Prci2g0384 2403 ProSiteProfiles AWS domain profile. 1433 1483 IPR006560 GO:0005634|GO:0042054
Prci2g0384 2403 ProSiteProfiles SET domain profile. 1485 1602 IPR001214 GO:0005515
Prci2g0384 2403 MobiDBLite consensus disorder prediction 1210 1239 - -
Prci2g0384 2403 Pfam CW-type Zinc Finger 1325 1371 IPR011124 GO:0008270
Prci2g0384 2403 CDD SET_SETD2 1484 1626 IPR044437 GO:0010452|GO:0046975
Prci2g0384 2403 ProSiteProfiles Zinc finger CW-type profile. 1319 1373 IPR011124 GO:0008270
Prci2g0384 2403 MobiDBLite consensus disorder prediction 1210 1258 - -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 1686 1704 - -
Prci2g0384 2403 SMART set_7 1485 1608 IPR001214 GO:0005515
Prci2g0384 2403 FunFam Histone-lysine N-methyltransferase 1317 1378 - -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 1240 1258 - -
Prci2g0384 2403 SMART PostSET_3 1610 1626 IPR003616 -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 1093 1128 - -
Prci2g0384 2403 FunFam Histone-lysine N-methyltransferase 1384 1641 - -
Prci2g0384 2403 Pfam AWS domain 1449 1482 IPR006560 GO:0005634|GO:0042054
Prci2g0384 2403 Gene3D SET domain 1380 1634 IPR046341 -
Prci2g0384 2403 SMART shorttest3 1433 1484 IPR006560 GO:0005634|GO:0042054
Prci2g0384 2403 MobiDBLite consensus disorder prediction 1680 1706 - -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 2231 2252 - -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 951 991 - -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 118 133 - -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 797 822 - -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 2091 2113 - -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 951 967 - -
Prci2g0384 2403 Pfam SET domain 1496 1602 IPR001214 GO:0005515
Prci2g0384 2403 ProSiteProfiles Post-SET domain profile. 1610 1626 IPR003616 -
Prci2g0384 2403 MobiDBLite consensus disorder prediction 808 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0384 Prci-Chr2 2687678 2707052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0384 1468 1625 C2H2 Transcription Factor Family AT2G23740 33.702 6.60e-20 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci2g0384 SET 4.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0384 - - pcin:129303139 4760.67