Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0380 ATGCAAATGCTGCAAGCGGGCCTGGCCGGAGAAGGCAGTGACGGGAAATCAAATGGCCGGACAGTGTTGGTGGGAGTGAAGTTGGATCCTCCCAGCAGGGAGTTGCTCACATTGGCTTTGGTTAAGGTTGCTCAGCCTGGTGATTTTGTGGTTGCTCTTCATGTTCTTGGGGACGATGAAATTGTGAACCAAGACGGGAAGGCGTCGCTTCTTTCGCTTGTCAAGGCATTTGACTCTGTTCTTGCTGTTTATGAAGGATTTTGCAATTTGAAACAGGTGGATCTAAAACTCAAAATCTGCAGAGGCTCGTCAGTCCGGAAAATCTTAGTTCGAGAAGCAAACGCCTGTTCTGCAACTCATATTTTAGTGGGAACTGCTCAAGGTCTTCGTAAAATGCGGTCATCTACCTCCGTAGCTAAGTACTGTTCTAAGAAGCTATCCAAGGACTGCTGGATTATTGCTGTCAATAATGGAAAAGTTGTATTCAAGAGAGAAGGCTCATCAGCCGCTCCTGTTGACTTGCAAGGAATGGATTGTCATGGCAGAAATGGCTTGCTTGCTTCAATTCACCGGACATTCAGTTCTAGTTCCAGAGTACTAGATGATGGCAACACAGGAATGCTTGACAAGGGTACTTACAAATCTTCGGATAACAGCTTAGCCATGGCCTTTCTCGATTCTACAGAAACCGTTCAGAAACAGAGCTGCTCACTTTGTGGTCCAGCATATGCATTGCCAAATTCTGCTTGCAACCAATGTGCGGAAGAGTCTTCTGGTGACAGTGGCAAAGAGAATTCTATGTCTATAGTGCTTGCACAGACGACCGAGGCAGCATCAAGTGCTAGCGTTCTGTCAGTCACAGAATTACCTGAACTAAAACCCGGTTGGCCACTACTACACAGGACAATTTCATCAGGTCGGCAATCTCTTGACAGGTCATTGGTGCGCCAGATCTCAGTGGTTCAGTGGGCAATGCAACTGCCAAGTAGAAACCCTTCATATGCTGGGGATCATGTTCACAGACCAGTCAGTTCTGGTCCCGATCATCATCAATCTTTGGGTCTAGATAGCGAGAGTGGTGCTATTGTTCCTGTAAATGCTCAAATAGGGACTGCCTCTTCGCCTGACCATAATTCAAGGAAAATTCCTGAAGAATTGAAGTGTCTTTATGAGAAATACTCATCAACCTGCAGATTGTTTAAGTACCAAGAACTTTTATTGGCTACATCAAATTTCTTGCCTGAAAATTTGATTGGGGAAGGAGGAAGTAGTCAGGTTTATAGAGGTTATCTTCCTGATGGCAAGGAACTAGCAGTTAAGATCCTAAAGCCTTCTGATGATGTTTTAAAAGAGTTTCTTTTGGAAATAGAAATTATCACTACCTTGCATCACAAAAACATTATTTCTCTCCTGGGATTCTGCATCGAGGACGGCAATCTTCTTTTGGTGTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGATTCTTCATGGGAGCAAGAAAAATCCACTTGTGTTTGGTTGGACTGAGAGGTATAAAGTGGCAGTTGGTGTTGCTGAGGCTATGGATTATCTGCATAATAGAGATGCTCAACGTGTGATTCACAGGGACGTAAAATCATCAAATGTATTATTATCTGAGGATTTTGAACCCCAGCTATCTGATTTTGGGCTTGCTAAATGGGCATCAACCTCGTCATCTCATATAACCTGCACAGATGTTGCTGGGACCTTTGGCTACTTGGCTCCAGAGTATTTCATGTATGGCAAAGTAAATGCTAAGATTGATGTCTACGCCTTTGGAGTTGTGCTCCTTGAGCTTCTAACAGGAAGAAAGCCCATAAGTGGTGATTATCCTAGAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCAATTCTGAGTAGCGGAAAAGTTGCACATTTATTAGATCCAAGTTTGGGTGGTAACTACGATCAGGACCAGATGGAGAGGATGGTCTTGGCAGCCTCACTTTGCATCAGACGTGCCCCGAGAGTTAGGCCTCAAATGAGCCTTATTACGAAGCTCCTTCAAGGTGATGCTGATGTAATTGAGTGGGCAAGGTTAGAAGTTAATGCTTCTAAGGCATTAGAAACGCATGATGATGAAGCTTGTCCACCTTCTAACTTACAGTCACATCTCAATCTAGCATTCCTTGATATGGAGGATGACTCACTCTCCATGTGCAGTATTGAGCAAAATGTCTCCTTAGAGGACTACCTGAGAGGCAGGTGGAGCCGCTCATCAAGCTTTGATTGA 2277 0.4431 MQMLQAGLAGEGSDGKSNGRTVLVGVKLDPPSRELLTLALVKVAQPGDFVVALHVLGDDEIVNQDGKASLLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREANACSATHILVGTAQGLRKMRSSTSVAKYCSKKLSKDCWIIAVNNGKVVFKREGSSAAPVDLQGMDCHGRNGLLASIHRTFSSSSRVLDDGNTGMLDKGTYKSSDNSLAMAFLDSTETVQKQSCSLCGPAYALPNSACNQCAEESSGDSGKENSMSIVLAQTTEAASSASVLSVTELPELKPGWPLLHRTISSGRQSLDRSLVRQISVVQWAMQLPSRNPSYAGDHVHRPVSSGPDHHQSLGLDSESGAIVPVNAQIGTASSPDHNSRKIPEELKCLYEKYSSTCRLFKYQELLLATSNFLPENLIGEGGSSQVYRGYLPDGKELAVKILKPSDDVLKEFLLEIEIITTLHHKNIISLLGFCIEDGNLLLVYDFLSRGSLEEILHGSKKNPLVFGWTERYKVAVGVAEAMDYLHNRDAQRVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLTGRKPISGDYPRGQESLVMWASPILSSGKVAHLLDPSLGGNYDQDQMERMVLAASLCIRRAPRVRPQMSLITKLLQGDADVIEWARLEVNASKALETHDDEACPPSNLQSHLNLAFLDMEDDSLSMCSIEQNVSLEDYLRGRWSRSSSFD 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0380 758 Gene3D Phosphorylase Kinase; domain 1 375 486 - -
Prci2g0380 758 Pfam Protein kinase domain 416 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0380 758 Gene3D Transferase(Phosphotransferase) domain 1 487 698 - -
Prci2g0380 758 CDD USP_Like 21 153 - -
Prci2g0380 758 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
Prci2g0380 758 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 381 486 - -
Prci2g0380 758 PANTHER OS08G0249100 PROTEIN 76 696 IPR046958 -
Prci2g0380 758 FunFam Putative receptor-like serine/threonine-protein kinase 487 699 - -
Prci2g0380 758 SUPERFAMILY Protein kinase-like (PK-like) 393 688 IPR011009 -
Prci2g0380 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Prci2g0380 758 ProSiteProfiles Protein kinase domain profile. 412 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0380 758 Pfam Universal stress protein family 20 153 IPR006016 -
Prci2g0380 758 SMART serkin_6 412 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0380 758 Gene3D HUPs 19 154 IPR014729 -
Prci2g0380 758 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 152 - -
Prci2g0380 758 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0380 Prci-Chr2 2668450 2672393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0380 399 679 Trihelix Transcription Factor Family AT1G68690 47.552 6.60e-79 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci2g0380 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0380 - - pcin:129303222 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0380 2 2668450 2672393 Prci15g0421 15 2745357 2751515 CCT