Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0379 ATGGATCATCCCTCCCACTTCCATCACCAGCACCAGCATGCAAGGTACGCTCCTCTTCCCCCTCATCACCCGCGCCATTCGCAGTTCCCCGAAGATCCCCGTTTGCGCCCTCACCACCTTCCTCTGCCGCCACAGCCGCCGGCACCAACTCTTGCACCCCCGCCCCCTCCCCCGTCTCTTTCCTATCGAACAGTCCGCACCCTTCCTCCCCCGCATCCCCACCCCTACAATCCTCCTCATCAATCCCAGCTTTCTTTGAACGCCCCGAACTATGCCCACCGTCCGGTTGAAGAAGAACGCCCTGTATCTGCTAGCCACCCTCATGATTTTAGTCACTCGCAGAGGGTTTCAAATCGGATGATTATTGATAATGATCGTCCTCGACATGGTTTCTCTGATTTCGACTATCGCAATGCCGATAACCGCATCGGTGGTTGGAACCCACCGAGGGTTTTGTCAGATAATCGGCCGTCGAGGCCTTACCCTCCCGTTGACTTTGACCGGGAATTGCATCATCAGCACCCATCGAATCACAAAATAGCGGCGCCATATCCGCCAGTTGATAAAGTTAGGTATAATTCAGAGGGCAACTCGAGGGGAAGAGTTGATCACAATGATGGTTATGAAATCAAGACAAGGGAGGAGTTTGCATGGGGTAGAGGCGATGAGAAATATCATCGCCGCGGGGATTTTGCATCAAATCTCAATGCATCTTCTGGAGACTTCGGAATCATGTCTAGTCAGAGTACATTATCAAGGGATCTTGATTCGAGAAATGGGGATTATGCGCATTACGGCATGGAACGGGACAACGAAATATCTAGGTGTACCAGAAGAGATGGACTTGGTGATAGCACGAGGTGGATAAATGATAGGAAGGGCCCCAGAGACCCACACAGTTTATCTTTTGAATTGGGAAACAACGAGAACGGTGGTGATGGTATTCGGGTAATGGCCGGGAAGTATTATGGTTCAGAATTGGGTAGATATAATAATAGAGGGAACAGGGAATCTGGTTATGAATTCAATCGTGCACCAAAGAAACAAATTCAGAAAAAGAGCGCACTTCTTAGAATTCAAATTGTAAAACCAAATCATAAGAACCGTGAGGTTGAACAGTTACAATATACCAGTTATGGTGATGACTCAAACTCTAATTCCTTTAGAGGCAAAGATCAATTTGAATATTCAGGTTTTGGGGTCAGAGGAGAAGAGAGAGAAAGAAGCCCTGTTGAGCTTGATATTTCTTTTAAATCAAATTCTCTGGTGGCTAAGGCCATTGTGGCACCTTCAAGTTCTGCAATTTCTGATGCAGATATCTCCGTTTCTGATACTGATTTTGCTCCTGCAGAAAAGGGAAAAAATGGTTTGGTCTCTGACAGTGATTCTCCTGATTTAAAACCTGCCAAACCATCTATGGCTGCTGGAAACTTAGGCGGCTCACCTTGCAAGGTAAATTGCATCCCTAGTTCTAGCAAGGAATTTAAGTTACAGAAGAAGGTCTCTGATAGTTCTCAGCTTTGTGCCACTGTAACTGCTAATTGTCATGGAAAAAATGAGGGGGCTCAAACCCCTAAGGGAATTCTTTCTCATGAAATTACCAACTCTTGTTCTGTTAAAACATCTCCAAGGGTTGCTAAGAAGAAAAAAGTTGTAAAGAAAGTGGTGAAGAAAGTTGTTTTGAATCCTGATTTAAATGTCTCCAGTTCCTTGTCATTGAATATGCCTGACAGAATTCTGAAAGCTGATAATGCTAGTCCTTCATCTACCTATGGATCTGACAAAACTGAAACTTCTTTAAAGGAGAAAATAACTGCTGTTGACAAGGTGTCCTTGCCAGATAATTTACTGTCTTCTCCGGAGGAAGGACATCTGATGCCCAATAATAGGAAGGAAGATGTACCTCTGCTGAGTACAGGGTCACATACCAGTTCACAAAAGCATGAGGCTGATGATAACCTTGATATGGGGAAAGTAGACGGAATTGAAAGAAGTGAAAACATTTCTAATTCTTCATTGGGTGCTTTTAGCATTAAAGATGAAAAGAATGATTCTGATTGCCCGAATGCAGGTGATTTTGTCCATGGCTTGCATATCAGTCCAAATACTGAAAAGGCTGCTAAGACTAAGTCAACCAATGGAACTTCTTTTTCTGATACCAGTAACAGCGATGATGTTGAGATGCAACTTTTTCAGAGTGAAGTGTCCCTATCACCTTGGCAGTATTCAAATGTACAATATTTAGATAATCAGTTTCAGGTAGAAGATGATAAGAACAGCAGACTGTCAACATCGGCTGAGAGTGAAATTAACACAGATGTTATAAACACATGTAATTCTGCTAATGTTAGTCTGGCTTGCTTGAGTTTTAATGAACTTACTGGTAATGCACTAAAGAACATTACAGTTTCTGACTTTGGAAATGATGGCAAGCTAGATTGCAAAACTAAAGCTCTTGCATTAACTGACAGCGTTATTTTAGGAGAAAACCTAGAGACTTGCTCCCCTGTACCAAGCGGTGAAATGGATGGTCGAACGTCAAGTTCTGGGGAAACTAGGATTTCAGATGGTCAAGAATGCCCAAAACATTCAAGAGTACCCATGCATGTTTCTGGTAATAGCCCCACTAATTCAGAAGAAAATATCATGGTTCCCCATAATGTTACTGTCAAAGATTCTGGAAAGGAGGCATCCCCTGTGGATGTCAATGCATCTCCTGAGACTTGTACCACAGAGCAGTCCCCAAATGCTAATTTTTTGGTTGTATTTGCTGAAGGAGATACAAATTTGTCCAAAAAAAGAAAAGTTGAGACACGTGTGAATTTTTCAAGTTCAGATATCAGGGGCATATCTCCAGACCCTATACATACAGTTAGCCTTGCAAATGTCCATACAACCTTAAGTCTGGTTAAGGATTCAAGTGTGTCTGAAGTTTTAAATCCACATGTTCAAAGCTCAAATTTTTGCTTACAATCCAGCACAGATGGGGTTAATGTTTTTCATGGGAAAGGGGAGGTTTCGGAGGCTGAAGTTTATTTTGGAAATAGTGGCAGTAACAGTGCAAATAGGGCTTCACCAATGTCTAAAATAAATGAAGTCACTACTAGTCACATGAATGTCACTTTATGTCAAGCTGAACTTTGTGATGCAATTGTGGTTGCCACATCTTGTGCTGAGGTTCCTATTAGTATAAGTGATAACAAGACACACCAGAAAGAGGTTGCATTTTCAAGCATGGTTAGACTTTCTGCTTCTCTATCCTTGCCTTATCCTGAGAGTAGTGCCAAATTATACAACAATAGTTTGTTTGGAGGATCTGTTGAGTCTGTGGATGCAAATACAAATATTACGAAGTTTGAATGCTCCCAATTGCAGCACCCAGGCATCAACTGTCATTCACTTGAGGATTTGGCTATTCCAAATAATCAGTTCCCAGTGTTGGAAAACGAGCATAAAGAAAAGTCTCTTCCAGTTGTGCCTTTAGACTACACTCAAAAGGACATTTTTGTTTCTGGAAATACTGTGAGAGAGAAGATTGACATACAGGATGCTGAAAAATGTGACTCCAGAGAATTTGTAGAAAGATCTTCGAGTGCTGATTTGGAATCCAGTGATCCTCAAACAAAGGATGATTTACCTCTTGAGCATCAATCTCTGTCCTGCCCAGTTGATACTGATGCTGTTACAACTAGTGACTGCAGTACAGTATCGAATATGCTTTCTTCAGGGACCAAGCCTGACATACTTGATAGTAGGACTTCAGATTGTCAAGCAATCCAAAACGAAACCATTCTAGGGGATGAACATAATGTGAATAGCAGATCTAATGTTGATCAGGATTGCGACTTACCTGCTTCTACATTATATTCACAGTATACTAGAAAGAATATAAAGTCAAGTCCTGCAGCCAGACGAGATAACTTGATCACAGGGAAGATGTTGTCTCAACCTTTGCAAGTTGATTCCAAAGTTATGACTCAAGGAATGAATTCATCTTGTTCAGAGTTAAATTGTGGCAAAAACCACTCAGGTTCTGCCATTCCTGCTACTTTCCAGGGCCGATCTTATTTAAATTTTCCCAAGTCAAAGGCATCTGCATTTTCAACCCAGGTTTCAAAACTTCGAACTTGGCACCGTGCAGGTAATAATTCTGGTTCTCTAACAGGAAACAAGCCTTTGGCAGGATCTGTGCCTCCCAAAAGGTCAATTTCAGAAAAGAAAGGGAACTTTCAGAATACTTCTTACATCCGTAAAGGTAACAACAGTCTTGTAAGGAAACATCCTTCAGTTTCCGCTCCACCACAATGCTCTGCTAATCAGTCTTCTTCTTTGGGGTTTGATGAATTTCGAAAGAGCACTGGATCTGAAATTAAGGTTGAAATCCCAAATCAAGCCAATCTCTTGAAAACAGGATTGACGCACGCTCCCTTGGAGAGGCAAAGAACACCTCCGCTACCTGTTGACAATAAATTACCTAATCATATGGTAACAGCATGTGAGGAGAATAAATCTTTCTCATTACTGGAACACCTTTCCAATGTTCCCTGTGATAATGCATCTGAACCTAGAAACTTTATGGAACCTTGTGATGCTCCAAACTCTGCAGAGGATGCACTGAAGTTGGGTGGAACTGTTGAAAGTCTAACTCTTTCATCAAACAATGTGGAAAGCCAAGTTGAAGCACATGATGAGAATGCGTCTTTGGATTCAAAGAGAATAACCTATGTAAAGCGCAAATCAAATCAGTTGGTTGCCACTTCAAATTCTTGTGAAGTTTCTGTTGCTACTGATGACAATGTCCAGATGGCCCCTTCTGATGGGTACTACAAGAGGAGCAAAAATCAGTTAGTTAGGACTACATTTGAAAGTCAAATGAACCAGACAGTTGTGATGCCCACTGTAAACTCTGATGGGCACATGGCCCGAAAGGCTAGCTGCAACAGGAGGATTAGTAAGAGGCGGTCATTGAAGGTAGTTGGAAGGTCATGCAAACCTTTGAGAGCCTCATTGGTGTGGACACTCTGTGGTGCAAGTTCATCCAAAAATGACAATGACCCTCTGCATCATCAGAAGGTTCTGCCTCACTTGTTTCCATGGAAAAGAGCATCACATTTACGGAGTTTCATTTGTAATCCTCTTTTGAGCTCCAATACTAGTCCGTTATCTGCAATCAGCAAGAAATTGGTTCTCTCGAGAAAGAGAGATACTGTTTATACTAGGTCAACCCATGGATTTTCCCTTCGGAAATCCAAGGTGTTAGGTGTTGGTGGATCTAGTCTAAAATGGTCAAAATCAATCGAGAAGTCTTCAAAGAAAGCTAACGAGGAAGCCACGCTTGCAGTTGCTGCTGTAGAGAAGAAAAAGAGGGAACAGAAAGATGTTGCTTGTATCAGTTCTCGGGCAAAGAGAGAACGTATATTTCGTATTGGGTCAGTTCGTTACAGAATGGACTCTTCGGGGAGGACACTTCAAAGAATTTCAGATGAGTCCATGCCCTCTGCTTCTCTCCGTTCAGGTTTGCATGTGAAAAGTTCATACATTCCAAGGAGATTAGTGATTGGAAATGATGAATATGTTCGAATTGGCAATGGCCATCAGCTTATCAGAGACCCAAAGAAGCGAACTCGAATGTTGGCTAATGAAAAAATTAGATGGAGTTTACACACAGTTAGACAACGGTTGGCTCGAAAGCAGAAGTATTGTCAATTCTTTACTAGATTCGGGAAATGTAACAAGGATGACAGGAAGTGTCCCTATATTCATGATCCCTCAAAAATTGCTGTCTGTACTAAGTTTCTGAATGGTTTATGTTCCACTCCCAACTGCAAACTGACTCATAAGGTTATACCAGAGAGAATGCCTGACTGTTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAATTGCCCCTATAGGCATGTTAATGTGAACCCTAAGGCACCTGTTTGTGAAGGATTTCTCCGGGGCTATTGTGCCAATGGCAACGAGTGTCGGAAGAAGCACACCTATGTCTGCCCTACTTTTGAAGCAACAGGAATCTGCACCCAAGGGACCAAATGCAAACTTCATCACCCCCAAAAACAAGGCAAAGGAAAGAAAAGGAAGAGATCCGTAGAGCAGAGGAACTGTAAAAGGCGATACTTTGGTTCTTTACAGATTGATGCTTCTGAACCTGGGACGATGGTTGTAGCTCCTCGGCAAGAGGAACAAAATAAGGATGACCTTGAAGGAGAACTGACTGACTATATCAGTCTGGATGTCGATGACGATGAAGACGTTGCAGAACTTACAGGACAAGCGAGCGAGCAATCAACATTATGTGATAGTGAACCTGTGGATATAGTGTTGGATGATCAGGATGAACTCATTAAACCGGTTCTTATAATGAAATCTCTAGTCTGA 6402 0.4216 MDHPSHFHHQHQHARYAPLPPHHPRHSQFPEDPRLRPHHLPLPPQPPAPTLAPPPPPPSLSYRTVRTLPPPHPHPYNPPHQSQLSLNAPNYAHRPVEEERPVSASHPHDFSHSQRVSNRMIIDNDRPRHGFSDFDYRNADNRIGGWNPPRVLSDNRPSRPYPPVDFDRELHHQHPSNHKIAAPYPPVDKVRYNSEGNSRGRVDHNDGYEIKTREEFAWGRGDEKYHRRGDFASNLNASSGDFGIMSSQSTLSRDLDSRNGDYAHYGMERDNEISRCTRRDGLGDSTRWINDRKGPRDPHSLSFELGNNENGGDGIRVMAGKYYGSELGRYNNRGNRESGYEFNRAPKKQIQKKSALLRIQIVKPNHKNREVEQLQYTSYGDDSNSNSFRGKDQFEYSGFGVRGEERERSPVELDISFKSNSLVAKAIVAPSSSAISDADISVSDTDFAPAEKGKNGLVSDSDSPDLKPAKPSMAAGNLGGSPCKVNCIPSSSKEFKLQKKVSDSSQLCATVTANCHGKNEGAQTPKGILSHEITNSCSVKTSPRVAKKKKVVKKVVKKVVLNPDLNVSSSLSLNMPDRILKADNASPSSTYGSDKTETSLKEKITAVDKVSLPDNLLSSPEEGHLMPNNRKEDVPLLSTGSHTSSQKHEADDNLDMGKVDGIERSENISNSSLGAFSIKDEKNDSDCPNAGDFVHGLHISPNTEKAAKTKSTNGTSFSDTSNSDDVEMQLFQSEVSLSPWQYSNVQYLDNQFQVEDDKNSRLSTSAESEINTDVINTCNSANVSLACLSFNELTGNALKNITVSDFGNDGKLDCKTKALALTDSVILGENLETCSPVPSGEMDGRTSSSGETRISDGQECPKHSRVPMHVSGNSPTNSEENIMVPHNVTVKDSGKEASPVDVNASPETCTTEQSPNANFLVVFAEGDTNLSKKRKVETRVNFSSSDIRGISPDPIHTVSLANVHTTLSLVKDSSVSEVLNPHVQSSNFCLQSSTDGVNVFHGKGEVSEAEVYFGNSGSNSANRASPMSKINEVTTSHMNVTLCQAELCDAIVVATSCAEVPISISDNKTHQKEVAFSSMVRLSASLSLPYPESSAKLYNNSLFGGSVESVDANTNITKFECSQLQHPGINCHSLEDLAIPNNQFPVLENEHKEKSLPVVPLDYTQKDIFVSGNTVREKIDIQDAEKCDSREFVERSSSADLESSDPQTKDDLPLEHQSLSCPVDTDAVTTSDCSTVSNMLSSGTKPDILDSRTSDCQAIQNETILGDEHNVNSRSNVDQDCDLPASTLYSQYTRKNIKSSPAARRDNLITGKMLSQPLQVDSKVMTQGMNSSCSELNCGKNHSGSAIPATFQGRSYLNFPKSKASAFSTQVSKLRTWHRAGNNSGSLTGNKPLAGSVPPKRSISEKKGNFQNTSYIRKGNNSLVRKHPSVSAPPQCSANQSSSLGFDEFRKSTGSEIKVEIPNQANLLKTGLTHAPLERQRTPPLPVDNKLPNHMVTACEENKSFSLLEHLSNVPCDNASEPRNFMEPCDAPNSAEDALKLGGTVESLTLSSNNVESQVEAHDENASLDSKRITYVKRKSNQLVATSNSCEVSVATDDNVQMAPSDGYYKRSKNQLVRTTFESQMNQTVVMPTVNSDGHMARKASCNRRISKRRSLKVVGRSCKPLRASLVWTLCGASSSKNDNDPLHHQKVLPHLFPWKRASHLRSFICNPLLSSNTSPLSAISKKLVLSRKRDTVYTRSTHGFSLRKSKVLGVGGSSLKWSKSIEKSSKKANEEATLAVAAVEKKKREQKDVACISSRAKRERIFRIGSVRYRMDSSGRTLQRISDESMPSASLRSGLHVKSSYIPRRLVIGNDEYVRIGNGHQLIRDPKKRTRMLANEKIRWSLHTVRQRLARKQKYCQFFTRFGKCNKDDRKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKAPVCEGFLRGYCANGNECRKKHTYVCPTFEATGICTQGTKCKLHHPQKQGKGKKRKRSVEQRNCKRRYFGSLQIDASEPGTMVVAPRQEEQNKDDLEGELTDYISLDVDDDEDVAELTGQASEQSTLCDSEPVDIVLDDQDELIKPVLIMKSLV 2133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0379 2133 ProSiteProfiles Zinc finger C3H1-type profile. 1895 1924 IPR000571 GO:0046872
Prci2g0379 2133 MobiDBLite consensus disorder prediction 704 722 - -
Prci2g0379 2133 FunFam zinc finger CCCH domain-containing protein 3 1925 1976 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 39 78 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 1405 1443 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 840 855 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 287 307 - -
Prci2g0379 2133 ProSiteProfiles Zinc finger C3H1-type profile. 1950 1976 IPR000571 GO:0046872
Prci2g0379 2133 MobiDBLite consensus disorder prediction 892 911 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 703 722 - -
Prci2g0379 2133 Gene3D - 1978 2040 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 1192 1215 - -
Prci2g0379 2133 Gene3D - 1922 1977 - -
Prci2g0379 2133 SMART c3hfinal6 1924 1948 IPR000571 GO:0046872
Prci2g0379 2133 SMART c3hfinal6 1950 1975 IPR000571 GO:0046872
Prci2g0379 2133 SMART c3hfinal6 1895 1923 IPR000571 GO:0046872
Prci2g0379 2133 SMART c3hfinal6 1977 2003 IPR000571 GO:0046872
Prci2g0379 2133 SMART c3hfinal6 2004 2026 IPR000571 GO:0046872
Prci2g0379 2133 MobiDBLite consensus disorder prediction 832 880 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 1379 1443 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 1 114 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 446 477 - -
Prci2g0379 2133 PANTHER CCCH ZINGC FINGER 336 2130 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 1192 1212 - -
Prci2g0379 2133 MobiDBLite consensus disorder prediction 612 655 - -
Prci2g0379 2133 ProSiteProfiles Zinc finger C3H1-type profile. 1977 2004 IPR000571 GO:0046872
Prci2g0379 2133 FunFam Zinc finger CCCH domain-containing protein 7 1978 2039 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0379 Prci-Chr2 2656153 2665764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0379 1901 2026 C2H2 Transcription Factor Family AT2G32930 32.576 2.87e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci2g0379 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0379 - - pcin:129303221 4127.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0379 2 2656153 2665764 Prci2g0379 2 2656153 2665764 ECH