Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0347 ATGGAAGATTCTAATTTTGTAGCAGCTGCTTCATCAGCCGGTGATCAGGACTCCAAGACTTGTCCTCGCGGTCACTGGAGGCCAGCCGAGGATGAAAAACTCCGGCAGCTTGTAGAACAATACGGTGCCCAGAACTGGAATTCAATTGCTGAGAAGCTCCAAGGAAGATCAGCAGGGAAAAGTTGCAGATTAAGGTGGTTTAATCAGCTTGATCCGAGGATTAACAGGAGGCCGTTTACAGAAGAAGAGGAAGAAAGATTGCTGGCAGCTCACCGCATTCACGGGAACAAGTGGGCACTGATAGCGAGGCTTTTTCCTGGTCGAACTGATAACGCTGTGAAGAATCACTGGCACGTTATTATGGCACGAAAGCAAAGAGAACAATCCAAGCAGCAGCTGAGTGGGAAGAGAGTCTTCCAAGATGTTTACAATGATTCTTCCAGTAACAGTTCCTCTTGTAATAAAAGATCAAAATCTCAAGATATCTTTAGTTCCCAAACGTTCTTTGACTTCCGGAACATGGATAAAAGCAGAATCATTGCAGAATATTCTCCCTCCGTGTCTTTGGCTTCTTGGAATTTTGCATCCATGGCGAAACAAGGAAAGGACAATAGTTACTTCAACCCCTGCTTTAATATTTACTTCTCAGAATGTTCCAAAAGTTCAGATAGATATCTTTACAGAATTTATCCAAATTCTGCATCATCGTATGGCAGCATTCTACCAAACTACAGGAGGGTTATTCCAGGTCCCTACGCAGCAGTCTTTGGTTGTGATGGTGGTGATGAGAGAAATAGGACAGTAAATAAGGACTTGACGAATGTATGCGACACTTCATCTGCATTTGCAAACACGAGAGCTTCTATGGAACAAGAGGAAGCAGATACACACACAGAAGTTCCTTTCATTGATTTTCTGGGCGTGGGTGTGCCATCGTCATGA 942 0.4384 MEDSNFVAAASSAGDQDSKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSAGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKQQLSGKRVFQDVYNDSSSNSSSCNKRSKSQDIFSSQTFFDFRNMDKSRIIAEYSPSVSLASWNFASMAKQGKDNSYFNPCFNIYFSECSKSSDRYLYRIYPNSASSYGSILPNYRRVIPGPYAAVFGCDGGDERNRTVNKDLTNVCDTSSAFANTRASMEQEEADTHTEVPFIDFLGVGVPSS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0347 313 FunFam MYB transcription factor 77 149 - -
Prci2g0347 313 FunFam MYB transcription factor 23 75 - -
Prci2g0347 313 CDD SANT 87 118 IPR001005 -
Prci2g0347 313 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Prci2g0347 313 CDD SANT 26 68 IPR001005 -
Prci2g0347 313 Gene3D - 78 139 - -
Prci2g0347 313 ProSiteProfiles Myb-like domain profile. 23 70 IPR001005 -
Prci2g0347 313 SMART sant 22 72 IPR001005 -
Prci2g0347 313 SMART sant 75 123 IPR001005 -
Prci2g0347 313 MobiDBLite consensus disorder prediction 1 26 - -
Prci2g0347 313 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Prci2g0347 313 Pfam Myb-like DNA-binding domain 76 119 IPR001005 -
Prci2g0347 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
Prci2g0347 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 70 IPR017930 -
Prci2g0347 313 Gene3D - 23 75 - -
Prci2g0347 313 SUPERFAMILY Homeodomain-like 22 117 IPR009057 -
Prci2g0347 313 PANTHER MYB PROTEIN-RELATED 23 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0347 Prci-Chr2 2483331 2484862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0347 21 135 MYB Transcription Factor Family AT1G17950 80.870 1.52e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci2g0347 Myb_DNA-binding 5.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0347 K09422 - gmx:100817328 340.887