Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0340 ATGGGCAGGTGGTGGTTTGTTGGGATTTGGATTGTTTTGGCCAATGCTTGGTCCTCGGTCCAAGGATACCCCTCAGAAGATCTGGTGGTGACTCTGCCTGGTCAACCCAAGGTCGAGTTTAGGCAGTATGCTGGGTATGTTGATGTCGATGTCAGCCATGGAAGGAGTTTGTTCTACTACTTCATCGAGGCCGATAAGGACCCCGACCAGAAGCCTCTTGCTCTCTGGCTCAATGGAGGCCCTGGATGCTCCTCCGTCGGTGGAGGTGCCTTCACTGAATTGGGCCCCTTCTATCCTCATGGTGATGGCCGTAGTCTCCGAAGAAATAGGATGTCTTGGAACAGAGCATCTAACCTCTTGTTTGTGGAGTCCCCCGCCGGAGTTGGATGGTCATACTCAAATACAACTTCAGATTATAACTGCGGGGATGCTTCCGCCGCCAATGATATGTATCTATTCATGTTGAAATGGTATGAGAAATTTCCAGCATTCAGAACAAGGGAGCTATTCCTTACAGGAGAAAGTTATGCAGGACATTACATACCACAGTTGGCTGATGCTCTGCTGAACCATAATGAAGCCTCCAGTGACTTCAAATTCAATATCAAAGGAGTAGCTATTGGAAACCCACTGCTGAGACTTGACCGGGACATTCCATCGACATATGAATTCTTCTGGTCGCATGGAATGATTTCTGACGAAATAGGCCTGGCCATCATGAATGAGTGCGATTTTGATGATTATGTCTTTGCAAGTCCTCACAACGTGTCCCTTTCATGCAACCGTGCCATATCCGAGGCAAATCGCATAGTTGGGGAATATATAAACAATTATGACGTGATCCTGGACGTTTGCTATCCATCCATAGTGGAGCAAGAACTGAGATTGAAAAAGATGGCTACCAAAATGAGTCTGGGTGTAGATGTTTGCATGACCCTTGAAAGACGTTTTTACTTCAATCTTCCTGAGGTTCAGAAGGCTCTTCACGCAAATCGCACCAATCTACCATATTCATGGTCCATGTGTAGCGGCATCTTAAATTATAGCGAGAGTGATGGGAACATCGACATCCTTCCTATTCTCAAGAGGATGGTTCAAAATAAAATCCCAGTGTGGGTTTTCAGCGGAGACCAAGATTCTGTGGTGCCATTAATGGGGTCTCGAACACTGGTGCGGGAGCTAGCGCATGAGCTGAAGATGGACATAACGGTGCCGTATGGAGCATGGTTCCACAAAGGGCAGGTAGGGGGTTGGGCAATAGAGTATGGAAACTTGTTGACGTTTGCGACGGTGAGAGGGGCAGCTCACATGGTGCCATATGCCCAGCCTTCCAGATCTCTCCATCTCTTCTCTTCCTTCCTCCGTGGCCGCCGACTTCCCAACACCACTCGCCTACCCATCCATGACTAG 1410 0.4816 MGRWWFVGIWIVLANAWSSVQGYPSEDLVVTLPGQPKVEFRQYAGYVDVDVSHGRSLFYYFIEADKDPDQKPLALWLNGGPGCSSVGGGAFTELGPFYPHGDGRSLRRNRMSWNRASNLLFVESPAGVGWSYSNTTSDYNCGDASAANDMYLFMLKWYEKFPAFRTRELFLTGESYAGHYIPQLADALLNHNEASSDFKFNIKGVAIGNPLLRLDRDIPSTYEFFWSHGMISDEIGLAIMNECDFDDYVFASPHNVSLSCNRAISEANRIVGEYINNYDVILDVCYPSIVEQELRLKKMATKMSLGVDVCMTLERRFYFNLPEVQKALHANRTNLPYSWSMCSGILNYSESDGNIDILPILKRMVQNKIPVWVFSGDQDSVVPLMGSRTLVRELAHELKMDITVPYGAWFHKGQVGGWAIEYGNLLTFATVRGAAHMVPYAQPSRSLHLFSSFLRGRRLPNTTRLPIHD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0340 469 FunFam Carboxypeptidase 357 456 - -
Prci2g0340 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Prci2g0340 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Prci2g0340 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Prci2g0340 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Prci2g0340 469 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
Prci2g0340 469 Gene3D - 310 346 - -
Prci2g0340 469 Pfam Serine carboxypeptidase 34 456 IPR001563 GO:0004185|GO:0006508
Prci2g0340 469 Gene3D - 357 456 - -
Prci2g0340 469 FunFam Carboxypeptidase 23 287 - -
Prci2g0340 469 SUPERFAMILY alpha/beta-Hydrolases 25 459 IPR029058 -
Prci2g0340 469 Gene3D alpha/beta hydrolase 24 286 IPR029058 -
Prci2g0340 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 443 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0340 Prci-Chr2 2401813 2405429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0340 316 459 Calmodulin-binding Proteins AT2G22960 24.490 4.89e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0340 K16297 - cave:132184947 803.512