LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g0312	ATGACGACTCCCACCACTCATCCCGTTTCCCAACCCCCTCAGATGCCTTTGTCTCGCAAATCATCATCTTCTCCCTCTCCCATCCCATCCACACCTTCATCTATTTATCCTTTTCCCCTCAAACAAACTGACATCGATGCCGCTGGCAATGCCGCTAATTTCGTTCACAGCACGGAGCAACCACCTCCCCACCGCCGCCGCCTTACTCGAGTCCGGAAGCTTCGCCACCTCACTGACCATGATGTTGGCTTGCACCTCACTGACGATTCTTCGCTCCTGGCTTCGCCTCCGCCCTCTCTCAAGTCTCGCTCATCGGGTGGTTCCGAGCACTGGTCCTCCTCCGCTGTGCCTCAACCTCTCCCGCTTCCCGAATCACCGTTGACTCGCCGGCCGGAGTCAACCGGTCCCAATCCCGGCCAGTTCCAGCTCGGATCTCCTTGCGTAGACCGTTCGGGCTTTGCTTTCGGGAGGAAGACGATGGATCACGATACATTGATAAATATGAAATCTTGGAGCAATATGGATAGATCTTGTGATCCAACCACTGCAAGCACAAAGTTTAATTTGAGAGTAAACATCCCAGTTGCAAGTTTCTTGATAGGTCACAGTTCATGTAAAGATCGAGCAATCTCTCGTGATACTGACTCTGAAAGTATTTATGACTCAAGATTGCGCGTGGCCACAAAGAGTGCCCCAACAAGTGTTTTTTCCAGTCCTGTTACCAGTCCTCGGAGATCAAGCAATGTAGATTTCACTGATCATTTCATTACTGCTCAAGAATTTCATGACAACCCAGTTGGCCATCCTTCGAAGGTGTCACCACCCTTGACTGTTCAAAGTCCAGATCATTCTTCTCTCCGTAGCCCAGGGTGCCGTAGTCCTTTCCTCAATCTCAAAATCCTAGATGGACCTCAGCATAGATTTCATTCCAGGGCGTGGCCAGAAAATAACCATGTTGACGCACATCCTTTGCCTCTTCCTCTTCCTCCTGGAGCTTCACCACCAGCACAATCATCTGTGCAGCGTCAATCAAGTGCCAAGCTTCATTCATTTGAAAGTCAATTTTCAGTGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGGGGCACTTTTGGAAGTGTTTATCATGCGACAAACCTAGAGACCGGTGCTTCATGTGCAATGAAGGAGGTGGATCTCATTCTAGATGACCCTAACTCTTCCAACTGTATAAAGCAACTAGAGCAGGAAATCAAGATTCTTCGTCAACTACAGCATCCAAATATTGTGCAGTATTATGGCAGTGAAACAGTTGGTGATCACTTGTGCATATACATGGAGTATGTTCATCCAGGGTCTGTTGATAAATTTGTGCGGGCAAATGGTGAAGCGATGACAGAGTCTGTAGTTCGCAATTTTACATGGCATATTCTCTCAGGGTTGGCTTACTTGCACAGCACCAAAACTATCCACAGGGATATCAAAGGAGCAAACTTACTTGTTGATGCATCAGGCACTGTCAAGCTTGCTGATTTTGGAATGGCGAAAGTTCTAACAGGGAAATCATATGACCTTTCTTTAAAGGGCAGTCCATACTGGATGGCTCCTGAGGTCATGAAGGCTGCCATGATGAAAGATGACAATCCTGACCTTGCCTATGCTGTTGATATCTGGAGCTTAGGTTGCACTATCATAGAGATGCTGACAGGAAGACCTCCATGGAGTGACTTTGAAGGGCCTCAAGCCATGTTCAAGGTACTGCACAATTCGCCATCAATACCAGAAACATTATCTTCAGCCGGAAAGGATTTTCTTCAGAGATGTTTTGAAAGGGATCCCGCAAATCGACCATCAGCAGCAAAGCTTCTTGAGCATGCCTTTGTACAAAATTTGCATGACCAAGAAGCTTTAGTTCGCCCACAATTATATCCCAGAGAAGACCCTGAAGAAAATTCACGTAGTCCCAAAGACAGTACTGCACGTAACCGTGATGTAATTCGAGCCTCCATGAGCTCACGGATCATCAACAAAATCCAGAAATTTATCGGAAGGTAA	2037	0.4698	MTTPTTHPVSQPPQMPLSRKSSSSPSPIPSTPSSIYPFPLKQTDIDAAGNAANFVHSTEQPPPHRRRLTRVRKLRHLTDHDVGLHLTDDSSLLASPPPSLKSRSSGGSEHWSSSAVPQPLPLPESPLTRRPESTGPNPGQFQLGSPCVDRSGFAFGRKTMDHDTLINMKSWSNMDRSCDPTTASTKFNLRVNIPVASFLIGHSSCKDRAISRDTDSESIYDSRLRVATKSAPTSVFSSPVTSPRRSSNVDFTDHFITAQEFHDNPVGHPSKVSPPLTVQSPDHSSLRSPGCRSPFLNLKILDGPQHRFHSRAWPENNHVDAHPLPLPLPPGASPPAQSSVQRQSSAKLHSFESQFSVKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDLILDDPNSSNCIKQLEQEIKILRQLQHPNIVQYYGSETVGDHLCIYMEYVHPGSVDKFVRANGEAMTESVVRNFTWHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKVLTGKSYDLSLKGSPYWMAPEVMKAAMMKDDNPDLAYAVDIWSLGCTIIEMLTGRPPWSDFEGPQAMFKVLHNSPSIPETLSSAGKDFLQRCFERDPANRPSAAKLLEHAFVQNLHDQEALVRPQLYPREDPEENSRSPKDSTARNRDVIRASMSSRIINKIQKFIGR	678

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Prci2g0312	678	FunFam	Predicted protein	357	640	-	-
Prci2g0312	678	MobiDBLite	consensus disorder prediction	92	115	-	-
Prci2g0312	678	ProSitePatterns	Protein kinases ATP-binding region signature.	367	390	IPR017441	GO:0005524
Prci2g0312	678	MobiDBLite	consensus disorder prediction	635	659	-	-
Prci2g0312	678	Pfam	Protein kinase domain	362	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Prci2g0312	678	MobiDBLite	consensus disorder prediction	635	657	-	-
Prci2g0312	678	MobiDBLite	consensus disorder prediction	1	69	-	-
Prci2g0312	678	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	73	633	-	-
Prci2g0312	678	MobiDBLite	consensus disorder prediction	1	29	-	-
Prci2g0312	678	Gene3D	Transferase(Phosphotransferase) domain 1	352	675	-	-

Showing 1 to 10 of 17 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g0312	Prci-Chr2	2185932	2193372	Dispersed/Tandem

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g0312	64	624	MAP Kinase Kinase Kinase	AT5G66850	47.395	7.04e-149	446

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Prci2g0312		Pkinase	4.8e-68	CL0016

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g0312	-		-	pcin:129303344	1280

Showing 1 to 1 of 1 entries

Previous1Next