Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0312 ATGACGACTCCCACCACTCATCCCGTTTCCCAACCCCCTCAGATGCCTTTGTCTCGCAAATCATCATCTTCTCCCTCTCCCATCCCATCCACACCTTCATCTATTTATCCTTTTCCCCTCAAACAAACTGACATCGATGCCGCTGGCAATGCCGCTAATTTCGTTCACAGCACGGAGCAACCACCTCCCCACCGCCGCCGCCTTACTCGAGTCCGGAAGCTTCGCCACCTCACTGACCATGATGTTGGCTTGCACCTCACTGACGATTCTTCGCTCCTGGCTTCGCCTCCGCCCTCTCTCAAGTCTCGCTCATCGGGTGGTTCCGAGCACTGGTCCTCCTCCGCTGTGCCTCAACCTCTCCCGCTTCCCGAATCACCGTTGACTCGCCGGCCGGAGTCAACCGGTCCCAATCCCGGCCAGTTCCAGCTCGGATCTCCTTGCGTAGACCGTTCGGGCTTTGCTTTCGGGAGGAAGACGATGGATCACGATACATTGATAAATATGAAATCTTGGAGCAATATGGATAGATCTTGTGATCCAACCACTGCAAGCACAAAGTTTAATTTGAGAGTAAACATCCCAGTTGCAAGTTTCTTGATAGGTCACAGTTCATGTAAAGATCGAGCAATCTCTCGTGATACTGACTCTGAAAGTATTTATGACTCAAGATTGCGCGTGGCCACAAAGAGTGCCCCAACAAGTGTTTTTTCCAGTCCTGTTACCAGTCCTCGGAGATCAAGCAATGTAGATTTCACTGATCATTTCATTACTGCTCAAGAATTTCATGACAACCCAGTTGGCCATCCTTCGAAGGTGTCACCACCCTTGACTGTTCAAAGTCCAGATCATTCTTCTCTCCGTAGCCCAGGGTGCCGTAGTCCTTTCCTCAATCTCAAAATCCTAGATGGACCTCAGCATAGATTTCATTCCAGGGCGTGGCCAGAAAATAACCATGTTGACGCACATCCTTTGCCTCTTCCTCTTCCTCCTGGAGCTTCACCACCAGCACAATCATCTGTGCAGCGTCAATCAAGTGCCAAGCTTCATTCATTTGAAAGTCAATTTTCAGTGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGGGGCACTTTTGGAAGTGTTTATCATGCGACAAACCTAGAGACCGGTGCTTCATGTGCAATGAAGGAGGTGGATCTCATTCTAGATGACCCTAACTCTTCCAACTGTATAAAGCAACTAGAGCAGGAAATCAAGATTCTTCGTCAACTACAGCATCCAAATATTGTGCAGTATTATGGCAGTGAAACAGTTGGTGATCACTTGTGCATATACATGGAGTATGTTCATCCAGGGTCTGTTGATAAATTTGTGCGGGCAAATGGTGAAGCGATGACAGAGTCTGTAGTTCGCAATTTTACATGGCATATTCTCTCAGGGTTGGCTTACTTGCACAGCACCAAAACTATCCACAGGGATATCAAAGGAGCAAACTTACTTGTTGATGCATCAGGCACTGTCAAGCTTGCTGATTTTGGAATGGCGAAAGTTCTAACAGGGAAATCATATGACCTTTCTTTAAAGGGCAGTCCATACTGGATGGCTCCTGAGGTCATGAAGGCTGCCATGATGAAAGATGACAATCCTGACCTTGCCTATGCTGTTGATATCTGGAGCTTAGGTTGCACTATCATAGAGATGCTGACAGGAAGACCTCCATGGAGTGACTTTGAAGGGCCTCAAGCCATGTTCAAGGTACTGCACAATTCGCCATCAATACCAGAAACATTATCTTCAGCCGGAAAGGATTTTCTTCAGAGATGTTTTGAAAGGGATCCCGCAAATCGACCATCAGCAGCAAAGCTTCTTGAGCATGCCTTTGTACAAAATTTGCATGACCAAGAAGCTTTAGTTCGCCCACAATTATATCCCAGAGAAGACCCTGAAGAAAATTCACGTAGTCCCAAAGACAGTACTGCACGTAACCGTGATGTAATTCGAGCCTCCATGAGCTCACGGATCATCAACAAAATCCAGAAATTTATCGGAAGGTAA 2037 0.4698 MTTPTTHPVSQPPQMPLSRKSSSSPSPIPSTPSSIYPFPLKQTDIDAAGNAANFVHSTEQPPPHRRRLTRVRKLRHLTDHDVGLHLTDDSSLLASPPPSLKSRSSGGSEHWSSSAVPQPLPLPESPLTRRPESTGPNPGQFQLGSPCVDRSGFAFGRKTMDHDTLINMKSWSNMDRSCDPTTASTKFNLRVNIPVASFLIGHSSCKDRAISRDTDSESIYDSRLRVATKSAPTSVFSSPVTSPRRSSNVDFTDHFITAQEFHDNPVGHPSKVSPPLTVQSPDHSSLRSPGCRSPFLNLKILDGPQHRFHSRAWPENNHVDAHPLPLPLPPGASPPAQSSVQRQSSAKLHSFESQFSVKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDLILDDPNSSNCIKQLEQEIKILRQLQHPNIVQYYGSETVGDHLCIYMEYVHPGSVDKFVRANGEAMTESVVRNFTWHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKVLTGKSYDLSLKGSPYWMAPEVMKAAMMKDDNPDLAYAVDIWSLGCTIIEMLTGRPPWSDFEGPQAMFKVLHNSPSIPETLSSAGKDFLQRCFERDPANRPSAAKLLEHAFVQNLHDQEALVRPQLYPREDPEENSRSPKDSTARNRDVIRASMSSRIINKIQKFIGR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0312 678 FunFam Predicted protein 357 640 - -
Prci2g0312 678 MobiDBLite consensus disorder prediction 92 115 - -
Prci2g0312 678 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Prci2g0312 678 MobiDBLite consensus disorder prediction 635 659 - -
Prci2g0312 678 Pfam Protein kinase domain 362 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0312 678 MobiDBLite consensus disorder prediction 635 657 - -
Prci2g0312 678 MobiDBLite consensus disorder prediction 1 69 - -
Prci2g0312 678 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 73 633 - -
Prci2g0312 678 MobiDBLite consensus disorder prediction 1 29 - -
Prci2g0312 678 Gene3D Transferase(Phosphotransferase) domain 1 352 675 - -
Prci2g0312 678 MobiDBLite consensus disorder prediction 315 345 - -
Prci2g0312 678 SMART serkin_6 361 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0312 678 SUPERFAMILY Protein kinase-like (PK-like) 339 648 IPR011009 -
Prci2g0312 678 MobiDBLite consensus disorder prediction 261 289 - -
Prci2g0312 678 MobiDBLite consensus disorder prediction 273 289 - -
Prci2g0312 678 MobiDBLite consensus disorder prediction 87 146 - -
Prci2g0312 678 ProSiteProfiles Protein kinase domain profile. 361 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0312 Prci-Chr2 2185932 2193372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0312 64 624 MAP Kinase Kinase Kinase AT5G66850 47.395 7.04e-149 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci2g0312 Pkinase 4.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0312 - - pcin:129303344 1280