Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0299 ATGCAGGTCTTGTGTTGTTTTTTATTTTTGTCATTCCTTCTCGCATCTATAGCCTTCTCAACTTCTCTTTCTAATGTTGAGATCTCCTTTATTGCTCGTCGACAATTATTAACACTTCGTGAAAATGAAGGTTTGCCTGAAAATTATGCAAATACTTACAAAACAAACCTAACTTTTCCCAATGATAGACTTAAAAGTGCTTATATTGCACTCCAAGCATGGAAAACTGCGATGTATTCAGACCCTTTCGAGACTACCAAGAATTGGGTAGGACAAGATGTTTGTTCCTACAATGGAGTTTTTTGTGCCTCAGCTTTGGATGATCCAAACATCACTGTTGTGGCTGGAGTTGATCTTAACCATGCAGATATTGCAGGCTATATTCCTGTCGAAATTGGTTTAATGGTCGACCTTGCTTTAATTCACATTAACTCTAATAGGTTTTGTGGGATTCTTCCCCATAGCTTCTCCAAGCTTAAGCTTTTATATGAGCTAGATATTAGCAATAATCGCTTTGTTGGGCCATTTCCAGAGTGTATACTACCAATTCCTGATCTTAAATACATTGACCTTAGATACAATAACTTTGAAGGCCAACTTCCTTTAGAGCTTTTTAATAAGCCTGCCGATGCTATATTTTTGAACAATAATCGATTTACATCCACAATTCCTGAAAATTTAGGGAATTCTTTAGCCTCTGTAATAGTGTTTTCCAATAACCATTTTGAAGGTTGCATTCCTAAAAGCATTGGTAAGATGGAAAAAACATTGAATGAGATTGTGTTCAGCAATAACAATCTCACTGGATGCCTGCCAACAGAAATTGGAAAGCTCGAAAGTGTAACAGTTTTTGATGTAAGTGAAAACCTATTTGGTGGCATCTTGCCTAAATCTTGTGACGGACTCAAAAAGGTAGAAGTGATATCAATTGCCCACAATAAGTTCACAGGTTTTGTCCCACAAAGTATATGTAGCTTGCCTAGCTTGGTGAATTTTACATTTGCCGATAATTATTTCAATGGTGAGGAGCAAGGTTGTGCACCTTCTTCTAGAAAGAATGTCGTGTTTGATGATACTGATAATTGCTTGCCAAATAAGTCAAAGCAAAAAGAAGCAAATGTCTGCTCTGTTGTGACGAGCAAGCCTATCGACTGTAGTAAGCAACAATGTGGCTATCCATCCTTAGTTTCAAAACCACAACCCCCTAAAGAAGAACCTACCAAGCCACAACTGAAACCCCATCCACCTAAAGAGGAACACCCTGAACCTCAGACACCTCCACAGCAACCTCCTAAAACACAACCTCCCCATCCACCTAAAGAAGAACAACCAAAAGAGCAAACTCCTCCTAAACCTCAGCCTCCTCAACCTAGCCCTGTATCACCAAAAGCACCATCTCCTGATCCTTTTGATAGAAACCCTAAACACCCCCACCGACCAAACTCACCACCATCTCAATCTCCCTTATCCCCAACTTACTCTCCACCACACCAGACTCAATCTCCAACCCCACTAGTTCACTCCTCTCCACCACCAGTCTACTCTCCACCTCTACCAGTTCACTCCCCTACACCTCCACCTCCTATATACTCACCACCTCTACCCTTAGTCTACTCTCCCCCACCTTCACCTCCTATATACTCGCCACCTCCACCCTTAGTGTACTCTCCCCCACCTCTACCCCATGTTCATTCTCCCCCACCTCCTATATACTCCCCACCACCTTCGATATACTCTCCACCTCCACCACCTATTCACTCTCCACCACCTCCATTTTTTTCACCTCCACCACCGATTTATTCTCCCCCACTTCCAATCTATTCTCCTCCACCTCCGATACACTCCCCACCACCTCCAATTTTCTCCCCACCACCTCCTGTCCACTCTCCTCCTCTGGTCCCAGTTTTCTCCTCACCTCCACCACCTATCCTCTCTCCCCCTCCCCTTACTTTATCTCCACCACCTTCTCCTCCTCCTTCAGATGATAACATCATTCTTCCTCCAGTTTTTGGTGCCTCATATGCATCACCCCCTCCGCCGATCATCTCTGGCTACTAA 2058 0.4315 MQVLCCFLFLSFLLASIAFSTSLSNVEISFIARRQLLTLRENEGLPENYANTYKTNLTFPNDRLKSAYIALQAWKTAMYSDPFETTKNWVGQDVCSYNGVFCASALDDPNITVVAGVDLNHADIAGYIPVEIGLMVDLALIHINSNRFCGILPHSFSKLKLLYELDISNNRFVGPFPECILPIPDLKYIDLRYNNFEGQLPLELFNKPADAIFLNNNRFTSTIPENLGNSLASVIVFSNNHFEGCIPKSIGKMEKTLNEIVFSNNNLTGCLPTEIGKLESVTVFDVSENLFGGILPKSCDGLKKVEVISIAHNKFTGFVPQSICSLPSLVNFTFADNYFNGEEQGCAPSSRKNVVFDDTDNCLPNKSKQKEANVCSVVTSKPIDCSKQQCGYPSLVSKPQPPKEEPTKPQLKPHPPKEEHPEPQTPPQQPPKTQPPHPPKEEQPKEQTPPKPQPPQPSPVSPKAPSPDPFDRNPKHPHRPNSPPSQSPLSPTYSPPHQTQSPTPLVHSSPPPVYSPPLPVHSPTPPPPIYSPPLPLVYSPPPSPPIYSPPPPLVYSPPPLPHVHSPPPPIYSPPPSIYSPPPPPIHSPPPPFFSPPPPIYSPPLPIYSPPPPIHSPPPPIFSPPPPVHSPPLVPVFSSPPPPILSPPPLTLSPPPSPPPSDDNIILPPVFGASYASPPPPIISGY 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0299 685 Gene3D Ribonuclease Inhibitor 66 232 IPR032675 -
Prci2g0299 685 SUPERFAMILY L domain-like 70 345 - -
Prci2g0299 685 MobiDBLite consensus disorder prediction 505 534 - -
Prci2g0299 685 MobiDBLite consensus disorder prediction 479 498 - -
Prci2g0299 685 MobiDBLite consensus disorder prediction 422 437 - -
Prci2g0299 685 MobiDBLite consensus disorder prediction 646 664 - -
Prci2g0299 685 FunFam Leucine-rich repeat extensin-like protein 1 68 229 - -
Prci2g0299 685 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 544 - -
Prci2g0299 685 MobiDBLite consensus disorder prediction 389 534 - -
Prci2g0299 685 Pfam Leucine rich repeat 138 196 IPR001611 GO:0005515
Prci2g0299 685 FunFam Leucine-rich repeat receptor protein kinase EMS1 230 322 - -
Prci2g0299 685 MobiDBLite consensus disorder prediction 405 421 - -
Prci2g0299 685 Gene3D Ribonuclease Inhibitor 233 376 IPR032675 -
Prci2g0299 685 MobiDBLite consensus disorder prediction 646 685 - -
Prci2g0299 685 MobiDBLite consensus disorder prediction 448 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0299 Prci-Chr2 2107447 2109768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0299 6 467 Trihelix Transcription Factor Family AT3G19020 54.678 1.24e-171 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0299 - - gmx:100780677 558.91