Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0292 ATGTTCACTACATCGCAGCCAGTAATTCGAAGCTTGACGAGTTTGCCAGACCTCTCCTTAAACATAAGCCCGCCGTGTATTTCAGAATGGGAAGTCAAAGAAGTTACGAGCAAAACGCTTTATAATGACATATGCTCAACTTCTGATTCTGGTAGCAGTGCTGGGAGTGACTTAAGCCATGAGAACAGCTTTCTTCACCTTGGCCATCCTGAGCCCACATTGAGCCTGGGCTTAGAAACCCCAGATTTGAATCCCCATCTTTTACAAGGAGTGCTCTCAAGAAACGCTAATTATCACTTCCACAACCATCAACCCCCCCTTCATGCCCGGTGCTTTAAGCGAAATGCTAGAGTCATTAGTGGTGCGAAAAGAAGCATCAGAGCTCCTAGAATGAGATGGACCACGACTCTTCACGCACAGTTTGTTCGAGCTGTTCAGCTCCTTGGCGGTCATGAAAGGGCCACTCCAAAGTCGGTATTAGAGTTAATGAATGTTAAGGATCTAACCTTAGCCCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACCGACAAAGGTACAGGTCATGGGCAGACGACAGATATGGGTTCGAGCCAAAGGCCAGAGATAAAAAATGTGAATGTGCATGGAGCTTCAGCCTGTGAGGGAGCTGCCCGTTTATTACCACAATCGCTCCAGAAACCTCTCAGAGCATCGTGGCAATCGTCAATGGAGACAAAAAAATATGACGATAGACAAAAACCCCAAATTGATTTGACGCGTTCTCGTGATCTCAAGGCAAAGGAAACAAAGGTAGATGGAGGGAATATAGGGCTGTGGAATTGCGTGAAGGAGAGGTTGGGTTGTAGCAATTTGTCACCTTCGGATGTGATGCATGACCTCGACTTCACACTCGGAAGACCCAGTTGGCAAACATGA 927 0.4671 MFTTSQPVIRSLTSLPDLSLNISPPCISEWEVKEVTSKTLYNDICSTSDSGSSAGSDLSHENSFLHLGHPEPTLSLGLETPDLNPHLLQGVLSRNANYHFHNHQPPLHARCFKRNARVISGAKRSIRAPRMRWTTTLHAQFVRAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQTTDMGSSQRPEIKNVNVHGASACEGAARLLPQSLQKPLRASWQSSMETKKYDDRQKPQIDLTRSRDLKAKETKVDGGNIGLWNCVKERLGCSNLSPSDVMHDLDFTLGRPSWQT 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0292 308 Gene3D - 128 185 - -
Prci2g0292 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 129 182 IPR006447 GO:0003677
Prci2g0292 308 SUPERFAMILY Homeodomain-like 126 183 IPR009057 -
Prci2g0292 308 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 307 IPR044847 GO:0000976|GO:0006355|GO:0010158
Prci2g0292 308 FunFam Myb family transcription factor 127 185 - -
Prci2g0292 308 Pfam Myb-like DNA-binding domain 130 181 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0292 Prci-Chr2 2040991 2044333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0292 1 210 G2-like Transcription Factor Family AT5G42630 52.607 2.27e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci2g0292 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0292 - - gmx:100780143 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0292 2 2040991 2044333 Prci8g0310 8 1967849 1971352 CCT
Prci2g0292 2 2040991 2044333 Prci2g0292 2 2040991 2044333 ECH