Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0288 ATGATCACAAAACACTCGCCTCTCATCCTTTTACTCGTTTTTCTCCTTCCCCTTATCCCGGTTCAATCAAACCGCCGCCACTGCCACCAAACATGCCGTCCGCACCGCTCCCCCGATGCCTTCCCCTACCCCTTTGGCTTCTCTTCCGGCTGCGCAATCCGACTCAACTGCAACCCCTCTGCCGGAATCCTCATAGGAGAATACCCGGTCCACTCCATTAACTCCGATACCATAATTGTCGGCGTCAAATCCCGATGCAATCGCCCGTTTCATACCTTCGGCCAACTCTTCAGCCATAGATACGCGCCCACGTCGCGAAACGCCATCCTTTTGCAAAACTGCAGCAAAACGGTCTCCCCATGCATCATCCCGGCGACCATGGTGCAGACTAGATTCGAGTCGAAAAACTGCAGCTCCGGCGGTGGCAATTTGAGTTGCTATTACGAAAACTCGACCGCTGATTTCATGAATCTCCAGAATTTAACAAACAAACACTGTACGTACCTCATGTCTTCGATAGCGGCTGAGGATTTAAGGAACAACTCGGATGTGAGTGCGGTGACAGCGGTATCATTGGAGGTTGAGACGATTGAGCTCGGATGGTGGCTGGAAGGAGAGTGCCAGTGTTCCAAGGATGCCAATTGTACGAGACTAAAATCGCCGATTGACAAGAAGCCAGGGTACCGGTGCCGTTGCAAGGAAGGATTCACGGGCGACGGGTACTTGGCCGGAAGTGGTTGTCGGAAAGACTCTTCAACCTGCAACCCTGCAAAGTACATGTCTGGCCAATGTGGAGGGGCAACCAGATTTGTTGTCTTGATTGGAGGAATGGTTTTTGGAGCTTCGTTAATGATCGGTTTGGGCCTAATATCTACTAGTCATGCCCAATGGAACATTAAATCAACATCTGTTGAGGGAGAGAGGATTGGGCTCCCATGGTCGGTTCGACTCACTATTGCTGCTGAAACAGCACGAGCCATAGCACACCTCCACTCTGCCATTGATCCCCCCATTTACCACAGGGACATTAAGTCAAGCAACATACTGTTGGACAACAATTTTAGATCCAAAGTGGCAGATTTTGGTCTTTCAAGGCCTGGAATGACCGAAATATCCCACGTTTCAACTGCCCCGCAAGGAACGCCTGGCTATGTTGATCCACAATACCATCAAGATTTCCACCTTTCTGATAAAAGTGACGTTTACAGCTTTGGGGTTGTACTTGTTGAGATCCTAACAGGATTGAAAGTGGTGGACTTTACTCGTCCCCAGAATGCAGTGAATTTGGCTTCTTTTGCTACGGACAGGATAGGGAAGGGGCTTTTGTATGAGATTATAGATCCATTCCTGGAAGCACATAACGATGATTGGACACATTTCTCCATACACAAGGTAGCCGAGCTAGCATTTCGCTGCCTCGCATTCCACAGGGACATGAGGCCTTCAATGACAGAAGTGGCTGCTGAGCTAGAGCAGATCAGACTGAGTAGGTGGACAACCTTTGAAGACAGCAATCGAATAGCCTCAACGGAGTTGTCCTCTTCTTCTCCTTCCTCTGATGAGAGTGAGAAGCCTCTGAGTGTGAAAGAAAATACGGTAGGACCGGAGGGCAAAGGGCTTCTCAAGTTGCAGACTAAGCCTGCCGCGTTAAACTTAATGGAAAGGCCGAAGAGCTCTCCGGTCTCGGTGCAAGACCCAGATTTTTGGCTGAGCGAACAAAGCTCTCCTTCATCGAATAGTTTGCTGAGTAAAAAATCATTCGAGTGA 1767 0.4935 MITKHSPLILLLVFLLPLIPVQSNRRHCHQTCRPHRSPDAFPYPFGFSSGCAIRLNCNPSAGILIGEYPVHSINSDTIIVGVKSRCNRPFHTFGQLFSHRYAPTSRNAILLQNCSKTVSPCIIPATMVQTRFESKNCSSGGGNLSCYYENSTADFMNLQNLTNKHCTYLMSSIAAEDLRNNSDVSAVTAVSLEVETIELGWWLEGECQCSKDANCTRLKSPIDKKPGYRCRCKEGFTGDGYLAGSGCRKDSSTCNPAKYMSGQCGGATRFVVLIGGMVFGASLMIGLGLISTSHAQWNIKSTSVEGERIGLPWSVRLTIAAETARAIAHLHSAIDPPIYHRDIKSSNILLDNNFRSKVADFGLSRPGMTEISHVSTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEILTGLKVVDFTRPQNAVNLASFATDRIGKGLLYEIIDPFLEAHNDDWTHFSIHKVAELAFRCLAFHRDMRPSMTEVAAELEQIRLSRWTTFEDSNRIASTELSSSSPSSDESEKPLSVKENTVGPEGKGLLKLQTKPAALNLMERPKSSPVSVQDPDFWLSEQSSPSSNSLLSKKSFE 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0288 588 Pfam Protein kinase domain 318 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0288 588 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 310 536 IPR044652 GO:0004672
Prci2g0288 588 SMART serkin_6 216 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0288 588 ProSiteProfiles Protein kinase domain profile. 133 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0288 588 Gene3D Laminin 207 242 - -
Prci2g0288 588 FunFam Wall-associated receptor kinase-like 20 298 503 - -
Prci2g0288 588 SUPERFAMILY Protein kinase-like (PK-like) 308 491 IPR011009 -
Prci2g0288 588 MobiDBLite consensus disorder prediction 509 588 - -
Prci2g0288 588 FunFam Wall-associated receptor kinase-like 14 isoform A 207 242 - -
Prci2g0288 588 MobiDBLite consensus disorder prediction 564 588 - -
Prci2g0288 588 Gene3D Transferase(Phosphotransferase) domain 1 300 513 - -
Prci2g0288 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0288 Prci-Chr2 2007255 2012039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0288 310 582 Receptor kinase-like Gene Family AT2G23450 63.768 1.31e-107 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci2g0288 Pkinase 2.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0288 - - pcin:129301809 1152.12