Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0278 ATGAAGCGAAGAGAGCAGCCACAGCTTCCTTGTCTAACAGAAGTTGAGTCAGATAGATTAAGTTGCTTACCTGGTCATGTTATAGATCACATTCTGTCACACTTGTCAATTCGAGAAGCTGTGAGGACAAGTGTTTTATCCAGCAGATGGAGGTACAAGTGGTCTACACTACCAAATCTTGTGTTTGATAACCAGTGTCTCCCCATATCTTCCCAGGATCATTCAATTATCAAGAACAAGCTTGTGAGAATTATTGATCATGTGCTTTTGCTTCACTCTGGTGTAATAAACAAGTTCAAGCTCTCCCATCGTGACCTAATTGGTGTGACTGACATTGATCGTTGGACTCTTCATCTAACCAGAAGGTCTGTTAAAGAACTTGTGCTGGAAATCTGGAAAGGGCATCGCTACAAGATACCCTCTTGTTTATTTACCTGCCAAAGTTTAATTTATTTGGAATTATTTAACTGCTGGCTTAAGCCTCCATCAACATTTTTAGGCTTCAGGAACTTGAAGAGTCTTGATCTACAGCATGTTACCATGGATCAAGATGTGTTTGAAAACTTAATTTCTAACTGCCCACTGCTTGAACGTCTAACTTTGATGAACTTTGATGGTTTCACTCATCTCAACATTGATGCTCCGAATCTTCAGTTTTTCGACATTGGAGGCAAATTTGAGGATGTTAGATTTGAGAACACTTTCCATTTAGCTGTTGTATCCATTGGTTTGTATTTGAACCTTGAAAATGAGAAAAATAGATGGCAAGGAAGTTCTAGCAATTTGCTCAAGTTCTTTGTTCATCTTCCTCATGTAAGAAGGTTGGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAGTAGGAGTTGTGCCGCTGAAGCTTCCTAGACCATGCATAGATTTAACTTATCTTTCCATACGCATCAATTTCAACGATTCCAAGGAAATTTCAGCTTCTTTATGCCTTTTAAGGAGTTCTCCGAATCTTCAAGAACTGGAAGTGTTGGCTCGCACTGAGGAGCAACAGACCACTCTGGGGACACAGGCCTACTGTTGGGAGGATGAGTATTGGAACTGCAAAGTGATGCAACTGCAATTTGTTAGGATAGACGGTATCTCCGGTATCAAACCGGAACTAGATTTTATCAGCTTTCTACTTCTATATTCTCCCGTTCTAGAACGGATGACTGTGAAACCTGCTCCTGCTCCTTCAAATGGAGGATCAGAGTTAATGAAAGAATTATTGCGTTTCAGGAGAGCATCAGGACGAGCGGAAATTATATACCTGGATCCTTGA 1296 0.4028 MKRREQPQLPCLTEVESDRLSCLPGHVIDHILSHLSIREAVRTSVLSSRWRYKWSTLPNLVFDNQCLPISSQDHSIIKNKLVRIIDHVLLLHSGVINKFKLSHRDLIGVTDIDRWTLHLTRRSVKELVLEIWKGHRYKIPSCLFTCQSLIYLELFNCWLKPPSTFLGFRNLKSLDLQHVTMDQDVFENLISNCPLLERLTLMNFDGFTHLNIDAPNLQFFDIGGKFEDVRFENTFHLAVVSIGLYLNLENEKNRWQGSSSNLLKFFVHLPHVRRLEVQSYFLKYLAVGVVPLKLPRPCIDLTYLSIRINFNDSKEISASLCLLRSSPNLQELEVLARTEEQQTTLGTQAYCWEDEYWNCKVMQLQFVRIDGISGIKPELDFISFLLLYSPVLERMTVKPAPAPSNGGSELMKELLRFRRASGRAEIIYLDP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0278 431 Gene3D - 10 105 - -
Prci2g0278 431 Gene3D Ribonuclease Inhibitor 106 337 IPR032675 -
Prci2g0278 431 Pfam F-box domain 20 53 IPR001810 GO:0005515
Prci2g0278 431 PANTHER F-BOX PROTEIN-LIKE 18 400 - -
Prci2g0278 431 Pfam Leucine Rich Repeat 170 194 IPR013101 -
Prci2g0278 431 SUPERFAMILY RNI-like 117 333 - -
Prci2g0278 431 SMART 9598neu4hmm 358 429 IPR006566 -
Prci2g0278 431 ProSiteProfiles F-box domain profile. 17 65 IPR001810 GO:0005515
Prci2g0278 431 SUPERFAMILY F-box domain 18 61 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0278 Prci-Chr2 1953662 1956822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0278 1 237 EF-hand Containing Proteins AT5G41840 26.255 2.56e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0278 - - gmx:100782183 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0278 2 1953662 1956822 Prci2g0278 2 1953662 1956822 ECH