Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0211 ATGGCTGAGGGGGAGGGGCTACACAATGACACTCTTGAAGGGGTCAAGCCTTCCACTGATCTGGATATTTCTGATGAGTTAGATCTGAAAATAAAGAAGTATCTGAGAGGAGAAGGTGCGAATTTGGAGGTTTTGAAAGACAAAAAACTGAAGGGTCTACTTTCTGTTAGAGAAGAGTTATATAGTAAATCTGCTAAAGTTGCTGCCAAGGCGGATAAGTGGCTTGTGCCCAGTGAGGGAGGTTATCTAGAGGCTGAAGGCATAGAGAAGACATGGAGGATCAAACAAGAGGCAATAGCTAAAGACGTAGATATCTTAAGCTCAAGAAACCAATATGATATTATTTTACCAGAACTTGGTCCATACACTTTGCAATTTACTTCAAGTGGCCGGCATATGGCTGTTGGAGGGCGTAAGGGTCATTTGGGAATTGTGGACTTGATGAATATGAGCCTAATCAGAGAGTTTCAGGTTAGAGAAACAGTCCGTGATGTGACATTCTTACATAATGAGCTGTTTTTTGCTGCTGCGCAGAAAAAGTACCCTTACATCTATAACCGTGATGGCACTGAGCTTCATTGCCTTGAGGAACATGGTGCTGTGTTAAGGCTTCAGTTTCTAAAAAACCACTTCCTCCTGGCTTCAATAAACAAGTTTGGGCAGCTGCATTATCAGGATGTTACGATGGGTGCAATGGTTGGAAATATTCGGACTGGTTTAGGTCGTACTGATGTGATGCAAGTGAACCCCTTCAACGGGGTTGTTGCTTTGGGTCATTCAAGCGGTACAGTCACAATGTGGAAGCCAGCAAGCTCAGCTCCTCTTGTCAAGATGTTGTGTCATCATGGTCCTCTCTCAGCTCTGGCATTTCACTCAAATGGCCACTTAATGGCCACAGCTGGAAAGGACAAAAAAATAAAGCTTTGGGACTTGAGGAAATTTGAGGTTCTCCAGACACTACATGGCCATGCCAACACCTTGGATTTTAGTCAAAAAGGATTACTTGCATGTGGTACTGGATCTTTTATACAGGTTCTGGGTGATCTTTCTGGTTCTCAGAATTACTCTAGGTATATGACTCATTCCATGGTTAAAGGTTACCAAATAGCAAAGTTAATGTTTCGACCATATGAAGATGTTCTAGGCATAGGGCATTCCATGGGTTGGTCCAGCATTCTTATTCCAGGATCAGGAGAACCTAACTTTGATACGTGGGTGGCCAATCCATTTGAAACATCTAAACAGAGGAGAGAGAAAGAAGTTCGCTCACTTCTGGATAAGCTGCCGCCTGAGACGATCATGCTGGACCCAAGCAAAATTGGTACAGTAAAGCCCACAAAGAAAGAGAAGCTGACAAAGGATATGGGGGCAGAGATGGAAGCTGCTGTTGAAGCTGCCAAGGACATTAAAATGAAGAAAAAAACTAAAGGAAGAAGTAAACCAAGCAAGATGGTGAAGAAGAAGAAGGAAGCAATTGAGAAAGTGAAAAGGCCTTTCTTGGAAGAAAAAATTAAGGAGGAAGCAATTTCCAGAAAGAAACAAAAAATCGACGAGGAAGGTAGTTTACCAAAATCTTTAAAGAGGTTTGCTGGTAGAAAACCAGCGACATGA 1611 0.4258 MAEGEGLHNDTLEGVKPSTDLDISDELDLKIKKYLRGEGANLEVLKDKKLKGLLSVREELYSKSAKVAAKADKWLVPSEGGYLEAEGIEKTWRIKQEAIAKDVDILSSRNQYDIILPELGPYTLQFTSSGRHMAVGGRKGHLGIVDLMNMSLIREFQVRETVRDVTFLHNELFFAAAQKKYPYIYNRDGTELHCLEEHGAVLRLQFLKNHFLLASINKFGQLHYQDVTMGAMVGNIRTGLGRTDVMQVNPFNGVVALGHSSGTVTMWKPASSAPLVKMLCHHGPLSALAFHSNGHLMATAGKDKKIKLWDLRKFEVLQTLHGHANTLDFSQKGLLACGTGSFIQVLGDLSGSQNYSRYMTHSMVKGYQIAKLMFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVRSLLDKLPPETIMLDPSKIGTVKPTKKEKLTKDMGAEMEAAVEAAKDIKMKKKTKGRSKPSKMVKKKKEAIEKVKRPFLEEKIKEEAISRKKQKIDEEGSLPKSLKRFAGRKPAT 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0211 536 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 278 312 - -
Prci2g0211 536 FunFam Os01g0183100 protein 187 381 - -
Prci2g0211 536 MobiDBLite consensus disorder prediction 470 490 - -
Prci2g0211 536 Pfam BING4CT (NUC141) domain 358 436 IPR012952 -
Prci2g0211 536 PANTHER WD-REPEAT PROTEIN BING4 21 530 IPR040315 -
Prci2g0211 536 SUPERFAMILY WD40 repeat-like 116 384 IPR036322 GO:0005515
Prci2g0211 536 Pfam WD domain, G-beta repeat 279 310 IPR001680 GO:0005515
Prci2g0211 536 MobiDBLite consensus disorder prediction 510 536 - -
Prci2g0211 536 Gene3D - 103 244 IPR015943 GO:0005515
Prci2g0211 536 MobiDBLite consensus disorder prediction 510 526 - -
Prci2g0211 536 SMART WD40_4 149 186 IPR001680 GO:0005515
Prci2g0211 536 SMART WD40_4 107 146 IPR001680 GO:0005515
Prci2g0211 536 SMART WD40_4 313 347 IPR001680 GO:0005515
Prci2g0211 536 SMART WD40_4 271 310 IPR001680 GO:0005515
Prci2g0211 536 SMART WD40_4 232 268 IPR001680 GO:0005515
Prci2g0211 536 ProSiteProfiles Trp-Asp (WD) repeats profile. 278 319 IPR001680 GO:0005515
Prci2g0211 536 SMART BING4CT_2 357 437 IPR012952 -
Prci2g0211 536 ProSitePatterns Trp-Asp (WD) repeats signature. 297 311 IPR019775 -
Prci2g0211 536 Gene3D - 245 354 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0211 162 333 U-box Gene Family AT2G33340 26.776 7.52e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0211 K14768 - qsa:O6P43_008897 837.025