Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0193 ATGGGTTCAGTGTCGGGGATCGTTTGTGTCACCGGGGCATCCGGCTTCATTGGTTCATGGCTTGTCATGCGACTCCTCGAGCGCGGCTACGCTGTTCGAGCCACCGTGCGAGACCCTGCTAACATGAAGAAGGTGAAGCATTTGTTGCAGCTGCCAAAAGCCGACACGCACCTGACTCTGTGGAAGGCCGATCTCGCCCTCGAGGGAAGTTTCGACGACGCCATCAATGGCTGCGCTGCAGTTTTCCATGTCGCCACCCCTATGGATTTCGAATCCAAGGATCCTGAGATGTATTTTGTTTCAAAGACGTTGGCAGAGCAAGAGGCATGGAAATTTGCCGAACAGCATAACATGGATTTCATCACTGTAATTCCTCCCCTTGTGGTTGGTCCCTTTCTTATGGATTCAATGCCTCCCAGTCTTATTACTGCTCTTTCCCCCATCACTGGGAATGAAGCGCATTATTCAATCATAAAGCAAGGCCAATTTGTTCACTTGGATGATCTCTGCATGGGTCACATATTCTTGTTAGAGCATCCTGAAGCAGAAGGAAGATACATCTGCTCTTCCCATGATGCCACCATTCATGACATTGCAAGAATGCTTGATCAAAAATACCCGGAGTGCAATGTCCCCATCAAGTTTGAGAATATTCCAGATGACTTGGAGATTGTGCACTTTTCTTCCAAGAAGATTAAAGACTTGGGATTCCAATTTAAATACAGCTTAGAGGACATGTTCACCGGAGCTGTTGATGCCTGCAGAGAGAAAGGGCTTCTTCCCAAGTCAACAGAAACTCGTGTTAATGGCACCACTGATCAGAAATGA 828 0.4758 MGSVSGIVCVTGASGFIGSWLVMRLLERGYAVRATVRDPANMKKVKHLLQLPKADTHLTLWKADLALEGSFDDAINGCAAVFHVATPMDFESKDPEMYFVSKTLAEQEAWKFAEQHNMDFITVIPPLVVGPFLMDSMPPSLITALSPITGNEAHYSIIKQGQFVHLDDLCMGHIFLLEHPEAEGRYICSSHDATIHDIARMLDQKYPECNVPIKFENIPDDLEIVHFSSKKIKDLGFQFKYSLEDMFTGAVDACREKGLLPKSTETRVNGTTDQK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0193 275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 262 IPR036291 -
Prci2g0193 275 Pfam NAD dependent epimerase/dehydratase family 96 183 IPR001509 -
Prci2g0193 275 CDD FR_SDR_e 8 237 - -
Prci2g0193 275 Gene3D - 1 96 - -
Prci2g0193 275 Gene3D - 97 272 - -
Prci2g0193 275 FunFam Dihydroflavonol reductase 96 262 - -
Prci2g0193 275 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 89 - -
Prci2g0193 275 Pfam GDP-mannose 4,6 dehydratase 10 85 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0193 Prci-Chr2 1512711 1516220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0193 1 254 Miscellaneous Gene Families AT1G09510 34.161 4.45e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0193 K13082 - rvl:131297914 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0193 2 1512711 1516220 Prci2g0193 2 1512711 1516220 ECH