Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0176 ATGGACTTGTCCGGTGGAAATTCGTCCATGTCCACCAGATTTCAGAGCTCTGGTTCTGAAGAGGATCTGCAGGCTTTGATGGATCAGAGAAAAAGGAAGAGAATGCAATCGAACCGGGAATCGGCAAAGCGATCCCGGATGCGAAAGCAAAAGCACTTGGATGATCTGATGGGCGAGGTGAGTCAGCTGAGAAAGGAAAATAGCGAAATCCTGACAAGCATAAACATCACCACACAACACTATCTGAAAATTGAGGCCGAAAACTCCGTATTGAGGGCTCGAACGGCGGAGCTTAGCCACAGGCTGCAATCACTCAACGATATTCTGAGCTTCATCAACACGAGCACTGGGTTTTATGAAACCGATTGCTATCCAGCGAGAGCAGACAACTTCATGAATCCCATGGGCATGCCCTTTCTCAATCAGCCTATTATGGCTTCTGCAGACGTTTTTCAGTAG 459 0.4771 MDLSGGNSSMSTRFQSSGSEEDLQALMDQRKRKRMQSNRESAKRSRMRKQKHLDDLMGEVSQLRKENSEILTSINITTQHYLKIEAENSVLRARTAELSHRLQSLNDILSFINTSTGFYETDCYPARADNFMNPMGMPFLNQPIMASADVFQ 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0176 152 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Prci2g0176 152 SUPERFAMILY Leucine zipper domain 30 84 IPR046347 GO:0003700|GO:0006355
Prci2g0176 152 MobiDBLite consensus disorder prediction 24 56 - -
Prci2g0176 152 Gene3D - 28 82 - -
Prci2g0176 152 MobiDBLite consensus disorder prediction 1 56 - -
Prci2g0176 152 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Prci2g0176 152 FunFam BZIP transcription factor 28 79 - -
Prci2g0176 152 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Prci2g0176 152 MobiDBLite consensus disorder prediction 1 23 - -
Prci2g0176 152 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Prci2g0176 152 Pfam bZIP transcription factor 30 86 IPR004827 GO:0003700|GO:0006355
Prci2g0176 152 Coils Coil 46 66 - -
Prci2g0176 152 PANTHER BZIP TRANSCRIPTION FACTOR 44 11 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0176 Prci-Chr2 1411066 1412556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0176 24 151 bZIP Transcription Factor Family AT4G34590 56.204 2.68e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci2g0176 bZIP_1 7.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0176 K25786 - vvi:100855209 209.534