Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0160 ATGGACTTCGATCCCCGCCAATACGAAAACCTCGCTATAAATGATAACGACGTCCAAAACATAGTTCTGTCATATCTTATTCATAATTGCTACAAAGAATCAGTGGAGTCATTTATTGCTTGCACAGGAATGAAGCAACCGGCAGACTATTTAGAAGACATGGAAAAAAGGAAAAGAATTTTTCACTTTGCATTAGAGGGAAATGCACTAAAGGCCATTGAGCTGACTGAACAGCTGGCACAGGATATTCTTGAGAAGAATAAGGACTTACGGTTTGATCTTTTAAGCCTTCACTTTGTTGAGCTTGTCAGGTCTAGGAAATGCACAGAAGCTTTGGAATTTGCTCAGAGCCAGTTGAGCCCTTTTGGGAAGGAGCAGAAATACATGGAAAAGCTTGAGGACTTTATGGCCCTTCTTGCTTATAAAGAGCCAGAGAAGTCCCCAATGTTTCATCTGCTCAGCTTAGAGTACCGGCAGCAGGTTGCAGATAGTTTAAATCGAGCTATTCTTGAACACTCAAACCTTCCCAGCTACACAGCAATGGAGAGGCTTATACAGCAAGCTACTGTAGTTAGGCAGTGCTTAAGTCAAGAGGCTGGAAAGGATGGGCATCCACCTTTTACATTGAAAGATTTTCTCAAAAGTTGA 648 0.4182 MDFDPRQYENLAINDNDVQNIVLSYLIHNCYKESVESFIACTGMKQPADYLEDMEKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLRFDLLSLHFVELVRSRKCTEALEFAQSQLSPFGKEQKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILEHSNLPSYTAMERLIQQATVVRQCLSQEAGKDGHPPFTLKDFLKS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0160 215 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Prci2g0160 215 PANTHER RAN BINDING PROTEIN 9-RELATED 8 200 - -
Prci2g0160 215 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Prci2g0160 215 SMART toby_final6 106 201 IPR013144 -
Prci2g0160 215 SMART ctlh 53 110 IPR006595 -
Prci2g0160 215 Pfam CTLH/CRA C-terminal to LisH motif domain 54 192 IPR024964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0160 Prci-Chr2 1331355 1335080 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0160 K23338 - gmx:100801338 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0160 2 1331355 1335080 Prci2g0160 2 1331355 1335080 ECH